RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 SETBP1Q9Y6X0 1596 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 DPEP1P16444 411 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 PFDN4Q9NQP4 134 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 SEPT9Q9UHD8 586 aaPredicted RBP15.78■□□□□ 0.12
CACNB1-206ENST00000539338 POC1B-GALNT4F8VUJ3 575 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 TFRCP02786 760 aaKnown RBP15.78■□□□□ 0.12
CACNB1-206ENST00000539338 ATP2A3Q93084 1043 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 VCX3BQ9H321 246 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 CPVLQ9H3G5 476 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 RIPOR2Q9Y4F9 1068 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 LRRC7Q96NW7 1537 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 H0YCG3 227 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 CDC27P30260 824 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 IFT88Q13099 833 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 ARL6IP4Q66PJ3 421 aaKnown RBP15.78■□□□□ 0.12
CACNB1-206ENST00000539338 MB21D2Q8IYB1 491 aaPredicted RBP15.78■□□□□ 0.12
CACNB1-206ENST00000539338 E9PCH4 1651 aa15.78■□□□□ 0.12
CACNB1-206ENST00000539338 CLTAP09496 248 aa15.77■□□□□ 0.12
CACNB1-206ENST00000539338 RASSF2P50749 326 aa15.77■□□□□ 0.12
CACNB1-206ENST00000539338 SNAP25P60880 206 aa15.77■□□□□ 0.12
CACNB1-206ENST00000539338 FAM114A2Q9NRY5 505 aa15.77■□□□□ 0.12
CACNB1-206ENST00000539338 PCDHB4Q9Y5E5 795 aa15.77■□□□□ 0.12
CACNB1-206ENST00000539338 ECE2O60344 883 aa15.77■□□□□ 0.12
CACNB1-206ENST00000539338 INTS9Q9NV88 658 aaKnown RBP15.77■□□□□ 0.12
CACNB1-206ENST00000539338 NMT2O60551 498 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 BMP3P12645 472 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 CASP8Q14790 479 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 CCDC38Q502W7 563 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 NACA2Q9H009 215 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 RRAGCQ9HB90 399 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 hCG_1984214I3L0E3 225 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 PRR29P0C7W0 189 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 KCNJ6P48051 423 aa15.77■□□□□ 0.11
CACNB1-206ENST00000539338 SPATS2Q86XZ4 545 aaKnown RBP15.77■□□□□ 0.11
CACNB1-206ENST00000539338 ZNF713Q8N859 430 aaPredicted RBP15.77■□□□□ 0.11
CACNB1-206ENST00000539338 USP27XA6NNY8 438 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 PNMA6AP0CW24 399 aaPredicted RBP15.76■□□□□ 0.11
CACNB1-206ENST00000539338 IGBP1P78318 339 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 TTBK2Q6IQ55 1244 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 SERPING1P05155 500 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 RRP15Q9Y3B9 282 aaKnown RBP15.76■□□□□ 0.11
CACNB1-206ENST00000539338 GIPC1O14908 333 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 PRDX5P30044 214 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 MAPK4P31152 587 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 HOXA13P31271 388 aaPredicted RBP15.76■□□□□ 0.11
CACNB1-206ENST00000539338 PHLDB2Q86SQ0 1253 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 TRIM50Q86XT4 487 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 AFAP1L2Q8N4X5 818 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 GABPB2Q8TAK5 448 aaPredicted RBP15.76■□□□□ 0.11
CACNB1-206ENST00000539338 SH3RF3Q8TEJ3 882 aaPredicted RBP15.76■□□□□ 0.11
CACNB1-206ENST00000539338 UBE2TQ9NPD8 197 aaPredicted RBP15.76■□□□□ 0.11
CACNB1-206ENST00000539338 SRGAP2BP0DMP2 458 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 GYS2P54840 703 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 DHX9Q08211 1270 aaKnown RBP15.76■□□□□ 0.11
CACNB1-206ENST00000539338 AP1M1Q9BXS5 423 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 LY9Q9HBG7 655 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 SEPT10Q9P0V9 454 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 FBXO40Q9UH90 709 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 ADAMTS1Q9UHI8 967 aa15.76■□□□□ 0.11
CACNB1-206ENST00000539338 SLC12A2P55011 1212 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 GABPAQ06546 454 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 SNAPC2Q13487 334 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 NAA30Q147X3 362 aaPredicted RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 ACCSQ96QU6 501 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 NACC1Q96RE7 527 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 NCAPD2Q15021 1401 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 RNF8O76064 485 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 CDC37Q16543 378 aaPredicted RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 MED10Q9BTT4 135 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 NOC2LQ9Y3T9 749 aaKnown RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 ARHGAP42A6NI28 874 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 POLR2BP30876 1174 aaKnown RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 DGKHQ86XP1 1220 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 PDLIM2Q96JY6 352 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 GNAT1P11488 350 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 MMP14P50281 582 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 FCGRTP55899 365 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 NNTQ13423 1086 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 SYDE2Q5VT97 1194 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 WDR11Q9BZH6 1224 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 KMT5AQ9NQR1 393 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 SRGAP2O75044 1071 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 SLCO1A2P46721 670 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 PSMD2Q13200 908 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 ZKSCAN8Q15776 578 aaPredicted RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 TRIM68Q6AZZ1 485 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 SP8Q8IXZ3 490 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 BBOF1Q8ND07 529 aa15.75■□□□□ 0.11
CACNB1-206ENST00000539338 RIOK1Q9BRS2 568 aaKnown RBP15.75■□□□□ 0.11
CACNB1-206ENST00000539338 H7C0C1 242 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 SH3BP5O60239 455 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 EPHX2P34913 555 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 MAP2K2P36507 400 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 ATP5OP48047 213 aa15.74■□□□□ 0.11
CACNB1-206ENST00000539338 YWHAGP61981 247 aaKnown RBP eCLIP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms