RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 RGS20O76081 388 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 CHRNA1P02708 482 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 GOLGA8HP0CJ92 632 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 ZMYM1Q5SVZ6 1142 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
YBX3-207ENST00000539204 TMEM105Q8N8V8 129 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 KREMEN2Q8NCW0 462 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 ATP8B4Q8TF62 1192 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 DDX19BQ9UMR2 479 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 CACNA1BQ00975 2339 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 ATG2AQ2TAZ0 1938 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 KIAA1217Q5T5P2 1943 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 FSD2A1L4K1 749 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 CFBP00751 764 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 LGALS2P05162 132 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 GHRP10912 638 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 CDC37Q16543 378 aaPredicted RBP14.04□□□□□ -0.16
YBX3-207ENST00000539204 TSHZ3Q63HK5 1081 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
YBX3-207ENST00000539204 DGLUCYQ7Z3D6 616 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 VSIG10LQ86VR7 867 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 CMTR2Q8IYT2 770 aaKnown RBP14.04□□□□□ -0.16
YBX3-207ENST00000539204 CPVLQ9H3G5 476 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 CHMP4BQ9H444 224 aaKnown RBP14.04□□□□□ -0.16
YBX3-207ENST00000539204 EHMT1Q9H9B1 1298 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 SORCS3Q9UPU3 1222 aa14.04□□□□□ -0.16
YBX3-207ENST00000539204 MED19A0JLT2 244 aaPredicted RBP14.03□□□□□ -0.16
YBX3-207ENST00000539204 NOP56O00567 594 aaKnown RBP14.03□□□□□ -0.16
YBX3-207ENST00000539204 SRGAP2BP0DMP2 458 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 ARHGAP4P98171 946 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 MTMR3Q13615 1198 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 LPIN1Q14693 890 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 ADGRF4Q8IZF3 695 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 CDCA3Q99618 268 aaPredicted RBP14.03□□□□□ -0.16
YBX3-207ENST00000539204 S1PR5Q9H228 398 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 NR2E1Q9Y466 385 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 PCDHGC5Q9Y5F6 944 aa14.03□□□□□ -0.16
YBX3-207ENST00000539204 KRT37O76014 449 aa14.02□□□□□ -0.17
YBX3-207ENST00000539204 UBA1P22314 1058 aaKnown RBP14.02□□□□□ -0.17
YBX3-207ENST00000539204 SP100P23497 879 aaPredicted RBP14.02□□□□□ -0.17
YBX3-207ENST00000539204 ADAM17P78536 824 aa14.02□□□□□ -0.17
YBX3-207ENST00000539204 RBM10P98175 930 aaKnown RBP14.02□□□□□ -0.17
YBX3-207ENST00000539204 RSPH3Q86UC2 560 aa14.02□□□□□ -0.17
YBX3-207ENST00000539204 PDCD2LQ9BRP1 358 aa14.02□□□□□ -0.17
YBX3-207ENST00000539204 MFSD1Q9H3U5 465 aa14.02□□□□□ -0.17
YBX3-207ENST00000539204 VAT1LQ9HCJ6 419 aa14.02□□□□□ -0.17
YBX3-207ENST00000539204 MAP3K20Q9NYL2 800 aaKnown RBP14.02□□□□□ -0.17
YBX3-207ENST00000539204 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 NRCAMQ92823 1304 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 FOXP2O15409 715 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 BRD1O95696 1058 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 STAG3L1P0CL83 205 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 TECP42680 631 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 CLCN5P51795 746 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 UBE3AQ05086 875 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 DUSP6Q16828 381 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 QRICH1Q2TAL8 776 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 TAF2Q6P1X5 1199 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 TMEM184AQ6ZMB5 413 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 STOX1Q6ZVD7 989 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 VN1R2Q8NFZ6 395 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 KCNG4Q8TDN1 519 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 RMDN1Q96DB5 314 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
YBX3-207ENST00000539204 PCDHB12Q9Y5F1 795 aa14.01□□□□□ -0.17
YBX3-207ENST00000539204 EP300Q09472 2414 aaPredicted RBP14.01□□□□□ -0.17
YBX3-207ENST00000539204 ZNF292O60281 2723 aa14□□□□□ -0.17
YBX3-207ENST00000539204 TTC3P53804 2025 aa14□□□□□ -0.17
YBX3-207ENST00000539204 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
YBX3-207ENST00000539204 HSD17B4P51659 736 aa14□□□□□ -0.17
YBX3-207ENST00000539204 PGM5Q15124 567 aa14□□□□□ -0.17
YBX3-207ENST00000539204 ALX1Q15699 326 aa14□□□□□ -0.17
YBX3-207ENST00000539204 PAN2Q504Q3 1202 aaKnown RBP14□□□□□ -0.17
YBX3-207ENST00000539204 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
YBX3-207ENST00000539204 PDE12Q6L8Q7 609 aaKnown RBP14□□□□□ -0.17
YBX3-207ENST00000539204 ANKRD54Q6NXT1 300 aa14□□□□□ -0.17
YBX3-207ENST00000539204 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
YBX3-207ENST00000539204 NPAS4Q8IUM7 802 aa14□□□□□ -0.17
YBX3-207ENST00000539204 CRIPAKQ8N1N5 446 aa14□□□□□ -0.17
YBX3-207ENST00000539204 LMBR1Q8WVP7 490 aa14□□□□□ -0.17
YBX3-207ENST00000539204 FTHL17Q9BXU8 183 aa14□□□□□ -0.17
YBX3-207ENST00000539204 BCAS3Q9H6U6 928 aa14□□□□□ -0.17
YBX3-207ENST00000539204 AAASQ9NRG9 546 aa14□□□□□ -0.17
YBX3-207ENST00000539204 SUPT16HQ9Y5B9 1047 aaKnown RBP14□□□□□ -0.17
YBX3-207ENST00000539204 EPG5Q9HCE0 2579 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 FGAP02671 866 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 HOXB8P17481 243 aaPredicted RBP13.99□□□□□ -0.17
YBX3-207ENST00000539204 CCND2P30279 289 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 ERVFC1P60507 584 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 MGAT3Q09327 533 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 NEDD9Q14511 834 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 PUM1Q14671 1186 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■□□□□ 9.4
YBX3-207ENST00000539204 SPOUT1Q5T280 376 aaKnown RBP13.99□□□□□ -0.17
YBX3-207ENST00000539204 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
YBX3-207ENST00000539204 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 CYFIP1Q7L576 1253 aa13.99□□□□□ -0.17
YBX3-207ENST00000539204 DGKHQ86XP1 1220 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms