RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CELF3Q5SZQ8 465 aaKnown RBP11.49□□□□□ -0.57
CLPB-210ENST00000539148 TAPT1Q6NXT6 567 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 CCDC62Q6P9F0 684 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 MIER3Q7Z3K6 550 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 CYP2W1Q8TAV3 490 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 SEPT1Q8WYJ6 367 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 GZF1Q9H116 711 aaPredicted RBP11.49□□□□□ -0.57
CLPB-210ENST00000539148 FLRT1Q9NZU1 646 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 HOOK1Q9UJC3 728 aaKnown RBP11.49□□□□□ -0.57
CLPB-210ENST00000539148 ZNF215Q9UL58 517 aaPredicted RBP11.49□□□□□ -0.57
CLPB-210ENST00000539148 PTCH2Q9Y6C5 1203 aa11.49□□□□□ -0.57
CLPB-210ENST00000539148 PPFIA4O75335 1185 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 IGHA2P01877 340 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 ZNF865P0CJ78 1059 aaPredicted RBP11.48□□□□□ -0.57
CLPB-210ENST00000539148 CMA1P23946 247 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 EPHA7Q15375 998 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 DGKDQ16760 1214 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 ZSCAN23Q3MJ62 389 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 CCDC183Q5T5S1 534 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 MAP3K21Q5TCX8 1036 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 NCAPH2Q6IBW4 605 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 LRSAM1Q6UWE0 723 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 CYFIP1Q7L576 1253 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 RNF180Q86T96 592 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 EXOC8Q8IYI6 725 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 PCSK9Q8NBP7 692 aaKnown RBP11.48□□□□□ -0.57
CLPB-210ENST00000539148 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 OR6J1Q8NGC5 347 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 PPTC7Q8NI37 304 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 HAS1Q92839 578 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 CCDC43Q96MW1 224 aaKnown RBP11.48□□□□□ -0.57
CLPB-210ENST00000539148 LRRC27Q9C0I9 530 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 KATNBL1Q9H079 304 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 TMEM60Q9H2L4 133 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 TUFT1Q9NNX1 390 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 DISC1Q9NRI5 854 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 PKD2L1Q9P0L9 805 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 USP25Q9UHP3 1055 aa11.48□□□□□ -0.57
CLPB-210ENST00000539148 FBXO2Q9UK22 296 aaPredicted RBP11.48□□□□□ -0.57
CLPB-210ENST00000539148 DDX39AO00148 427 aaKnown RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 BACH1O14867 736 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 FARP2O94887 1054 aaPredicted RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 CAVIN2O95810 425 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 P4HBP07237 508 aaKnown RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 LY6KQ17RY6 165 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 KANK3Q6NY19 840 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 CAVIN1Q6NZI2 390 aaKnown RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 OTUD6AQ7L8S5 288 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 TLK2Q86UE8 772 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 MRPS27Q92552 414 aaKnown RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 ZFP91Q96JP5 570 aaPredicted RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 FAM167AQ96KS9 214 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 KATNAL1Q9BW62 490 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 CCSER1Q9C0I3 900 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 CUEDC2Q9H467 287 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 SMARCAD1Q9H4L7 1026 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 ZSWIM4Q9H7M6 989 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 XPNPEP3Q9NQH7 507 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 DDX20Q9UHI6 824 aaKnown RBP11.47□□□□□ -0.57
CLPB-210ENST00000539148 PCDHA7Q9UN72 937 aa11.47□□□□□ -0.57
CLPB-210ENST00000539148 DHX15O43143 795 aaKnown RBP11.46□□□□□ -0.57
CLPB-210ENST00000539148 DYNC1LI2O43237 492 aaPredicted RBP11.46□□□□□ -0.57
CLPB-210ENST00000539148 CHMP2AO43633 222 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 EDIL3O43854 480 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 ATP9AO75110 1047 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 CABYRO75952 493 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 XRCC6P12956 609 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLPB-210ENST00000539148 SMPD1P17405 629 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 RPA1P27694 616 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 CCT6AP40227 531 aaKnown RBP11.46□□□□□ -0.57
CLPB-210ENST00000539148 QARSP47897 775 aaKnown RBP11.46□□□□□ -0.57
CLPB-210ENST00000539148 ACTR2P61160 394 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 PSMC5P62195 406 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 AMPD3Q01432 767 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 ITGB3BPQ13352 177 aaPredicted RBP11.46□□□□□ -0.57
CLPB-210ENST00000539148 UVSSAQ2YD98 709 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 CABP7Q86V35 215 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 IQUBQ8NA54 791 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 GPT2Q8TD30 523 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 SNX29Q8TEQ0 813 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 GLG1Q92896 1179 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 NACC1Q96RE7 527 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 SEZ6LQ9BYH1 1024 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 FTOQ9C0B1 505 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLPB-210ENST00000539148 CSRNP2Q9H175 543 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 MAGEF1Q9HAY2 307 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 PDGFCQ9NRA1 345 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 NRBP2Q9NSY0 501 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 STK17AQ9UEE5 414 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 VAV3Q9UKW4 847 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 PPME1Q9Y570 386 aa11.46□□□□□ -0.57
CLPB-210ENST00000539148 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.58
CLPB-210ENST00000539148 PDE4DIPQ5VU43 2346 aa11.46□□□□□ -0.58
CLPB-210ENST00000539148 EMSYQ7Z589 1322 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms