RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 DDX21Q9NR30 783 aaKnown RBP eCLIP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 C1orf112Q9NSG2 853 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 RLIMQ9NVW2 624 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NKRFO15226 690 aaKnown RBP eCLIP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NRP2O60462 931 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NPHS1O60500 1241 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TBC1D8O95759 1140 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 AMY2AP04746 511 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 MSL3P1P0C860 447 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 AMY2BP19961 511 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 SDHBP21912 280 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GDNFP39905 211 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ECI1P42126 302 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF280AP59817 542 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TCIRG1Q13488 830 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NFYCQ13952 458 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PCBP2Q15366 365 aaKnown RBP eCLIP1.41□□□□□ -2.181e-6■■■□□ 17.3
HIF1A-204ENST00000539097 TUBB8Q3ZCM7 444 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 FIGNQ5HY92 759 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 SFRP5Q5T4F7 317 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PIK3R6Q5UE93 754 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 HEATR6Q6AI08 1181 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ESRP1Q6NXG1 681 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NSMFQ6X4W1 530 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 LBX2Q6XYB7 198 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ADAT2Q7Z6V5 191 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ZAR1Q86SH2 424 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CCDC144CPQ8IYA2 1237 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CISD2Q8N5K1 135 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TOP6BLQ8N6T0 577 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 IGSF22Q8N9C0 903 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PCDH19Q8TAB3 1148 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 UHMK1Q8TAS1 419 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TGFBRAP1Q8WUH2 860 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ATXN2LQ8WWM7 1075 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 MTMR8Q96EF0 704 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 JAM3Q9BX67 310 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 SLC12A9Q9BXP2 914 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 DHX36Q9H2U1 1008 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 SMURF1Q9HCE7 757 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 EPB41L4AQ9HCS5 686 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 EMC7Q9NPA0 242 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CLEC1BQ9P126 229 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NUDT5Q9UKK9 219 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GJD2Q9UKL4 321 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CAPN11Q9UMQ6 739 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PASKQ96RG2 1323 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 KLRG2A4D1S0 409 aaPredicted RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 RNGTTO60942 597 aaKnown RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 FKTNO75072 461 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 SRGAP2CP0DJJ0 459 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 PLS3P13797 630 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 CYP2C19P33261 490 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 GRIK1P39086 918 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 GUCY2FP51841 1108 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 PCBP3P57721 371 aaKnown RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 LSAMPQ13449 338 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF267Q14586 743 aaPredicted RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 USP53Q70EK8 1073 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 PLD6Q8N2A8 252 aaKnown RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF610Q8N9Z0 462 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 SMC1BQ8NDV3 1235 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 LINC01599Q8WXQ3 324 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 DDX17Q92841 729 aaKnown RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 FUBP1Q96AE4 644 aaKnown RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 CYFIP2Q96F07 1278 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 SUCLG2Q96I99 432 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 ZNF496Q96IT1 587 aaPredicted RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 LRFN3Q9BTN0 628 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 PITHD1Q9GZP4 211 aaPredicted RBP1.4□□□□□ -2.18
HIF1A-204ENST00000539097 EPB41L1Q9H4G0 881 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 IFT22Q9H7X7 185 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 SFMBT1Q9UHJ3 866 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 ZBTB21Q9ULJ3 1066 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 ANKRD6Q9Y2G4 727 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 PTPN22Q9Y2R2 807 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 NEU2Q9Y3R4 380 aa1.4□□□□□ -2.18
HIF1A-204ENST00000539097 TEX33O43247 280 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 HPXP02790 462 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 FAM87AP0C7U9 286 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 ATP2A2P16615 1042 aaKnown RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 GBP1P32455 592 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 LTBRP36941 435 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 OXCT1P55809 520 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 WNT3AP56704 352 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 DUSP27Q5VZP5 1158 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 NOL8Q76FK4 1167 aaKnown RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CHST15Q7LFX5 561 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 CATIPQ7Z7H3 387 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 WDR75Q8IWA0 830 aaKnown RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 FBXL6Q8N531 539 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 PNISRQ8TF01 805 aaKnown RBP1.4□□□□□ -2.19
HIF1A-204ENST00000539097 WFDC12Q8WWY7 111 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 HOOK2Q96ED9 719 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 MFSD14AQ96MC6 490 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 MTA3Q9BTC8 594 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 G6PC3Q9BUM1 346 aa1.4□□□□□ -2.19
HIF1A-204ENST00000539097 ASCC2Q9H1I8 757 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms