RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 NDUFA8P51970 172 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 SNW1Q13573 536 aaKnown RBP19.4■□□□□ 0.7
CLN6-202ENST00000538696 LRCH2Q5VUJ6 765 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 CYFIP1Q7L576 1253 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 TLK2Q86UE8 772 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 OR6J1Q8NGC5 347 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 SDF4Q9BRK5 362 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 NUP62CLQ9H1M0 184 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 CLSTN2Q9H4D0 955 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 TBC1D22BQ9NU19 505 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 DUSP11O75319 330 aaKnown RBP19.39■□□□□ 0.69
CLN6-202ENST00000538696 PRPHP41219 470 aa19.39■□□□□ 0.69
CLN6-202ENST00000538696 TXKP42681 527 aa19.39■□□□□ 0.69
CLN6-202ENST00000538696 IL17AQ16552 155 aa19.39■□□□□ 0.69
CLN6-202ENST00000538696 METTL7BQ6UX53 244 aa19.39■□□□□ 0.69
CLN6-202ENST00000538696 B3GNT9Q6UX72 402 aa19.39■□□□□ 0.69
CLN6-202ENST00000538696 DHX37Q8IY37 1157 aaKnown RBP19.39■□□□□ 0.69
CLN6-202ENST00000538696 FMR1NBQ8N0W7 255 aaPredicted RBP19.39■□□□□ 0.69
CLN6-202ENST00000538696 GIMAP8Q8ND71 665 aaPredicted RBP19.39■□□□□ 0.69
CLN6-202ENST00000538696 EMID1Q96A84 441 aaPredicted RBP19.39■□□□□ 0.69
CLN6-202ENST00000538696 UNC45AQ9H3U1 944 aa19.39■□□□□ 0.69
CLN6-202ENST00000538696 JPH1Q9HDC5 661 aaPredicted RBP19.39■□□□□ 0.69
CLN6-202ENST00000538696 PAK6Q9NQU5 681 aaPredicted RBP19.39■□□□□ 0.69
CLN6-202ENST00000538696 SYNRGQ9UMZ2 1314 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 FAM237AA0A1B0GTK4 181 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 CCNE2O96020 404 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 RARBP10826 455 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 SP4Q02446 784 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 SPIRE1Q08AE8 756 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 SPECC1Q5M775 1068 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 ARL6IP4Q66PJ3 421 aaKnown RBP19.38■□□□□ 0.69
CLN6-202ENST00000538696 ZNF579Q8NAF0 562 aaKnown RBP19.38■□□□□ 0.69
CLN6-202ENST00000538696 FERMT2Q96AC1 680 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 CSRNP2Q9H175 543 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 UPF3AQ9H1J1 476 aaKnown RBP19.38■□□□□ 0.69
CLN6-202ENST00000538696 TTC12Q9H892 705 aaPredicted RBP19.38■□□□□ 0.69
CLN6-202ENST00000538696 MLXIPQ9HAP2 919 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 SLC9A2Q9UBY0 812 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 HPSEQ9Y251 543 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 Q9Y3F1 56 aa19.38■□□□□ 0.69
CLN6-202ENST00000538696 MYH9P35579 1960 aaKnown RBP19.38■□□□□ 0.69
CLN6-202ENST00000538696 CTAGE5O15320 804 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 DYNC1LI2O43237 492 aaPredicted RBP19.37■□□□□ 0.69
CLN6-202ENST00000538696 MSCO60682 206 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 IRX5P78411 483 aaPredicted RBP19.37■□□□□ 0.69
CLN6-202ENST00000538696 KRT76Q01546 638 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 LAMC2Q13753 1193 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 LHX8Q68G74 356 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 GAS2L3Q86XJ1 694 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 SPATA33Q96N06 139 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 RNF208Q9H0X6 261 aa19.37■□□□□ 0.69
CLN6-202ENST00000538696 MYADML2A6NDP7 307 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 CHMP2AO43633 222 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 KINO60870 393 aaKnown RBP19.36■□□□□ 0.69
CLN6-202ENST00000538696 ADAMTS4O75173 837 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 TECP42680 631 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 FXR2P51116 673 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLN6-202ENST00000538696 GJA9P57773 515 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 PPP2R5CQ13362 524 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 CAMK4Q16566 473 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 HSDL1Q3SXM5 330 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 ZNF746Q6NUN9 644 aaPredicted RBP19.36■□□□□ 0.69
CLN6-202ENST00000538696 AFG1LQ8WV93 481 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 GPR20Q99678 358 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 AP5M1Q9H0R1 490 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 XPNPEP3Q9NQH7 507 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 PCDHA12Q9UN75 941 aa19.36■□□□□ 0.69
CLN6-202ENST00000538696 VWA3AA6NCI4 1184 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 POTEMA6NI47 508 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 EML1O00423 815 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 PGK1P00558 417 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 MMP3P08254 477 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 ACTR2P61160 394 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 NKX3-2P78367 333 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 TMEM266Q2M3C6 531 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 NCAPH2Q6IBW4 605 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 DTHD1Q6ZMT9 781 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 USP49Q70CQ1 688 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 PPTC7Q8NI37 304 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 DEFB118Q96PH6 123 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 TNMDQ9H2S6 317 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 TCEAL9Q9UHQ7 104 aa19.35■□□□□ 0.69
CLN6-202ENST00000538696 GSTTP1A0A1W2PQM5 241 aa19.34■□□□□ 0.69
CLN6-202ENST00000538696 SYKP43405 635 aa19.34■□□□□ 0.69
CLN6-202ENST00000538696 BEX3Q00994 111 aa19.34■□□□□ 0.69
CLN6-202ENST00000538696 LRSAM1Q6UWE0 723 aa19.34■□□□□ 0.69
CLN6-202ENST00000538696 FAM13BQ9NYF5 915 aa19.34■□□□□ 0.69
CLN6-202ENST00000538696 CENPFP49454 3210 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 FSD2A1L4K1 749 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 A6NJR5 290 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 WDR64B1ANS9 1081 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 NOP56O00567 594 aaKnown RBP19.33■□□□□ 0.69
CLN6-202ENST00000538696 ZNF202O95125 648 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 LETM1O95202 739 aaPredicted RBP19.33■□□□□ 0.69
CLN6-202ENST00000538696 C6orf222P0C671 652 aaPredicted RBP19.33■□□□□ 0.69
CLN6-202ENST00000538696 HOXD8P13378 290 aaPredicted RBP19.33■□□□□ 0.69
CLN6-202ENST00000538696 JAK3P52333 1124 aa19.33■□□□□ 0.69
CLN6-202ENST00000538696 FSCN1Q16658 493 aaKnown RBP19.33■□□□□ 0.69
CLN6-202ENST00000538696 COL13A1Q5TAT6 717 aaPredicted RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms