RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SH2D4AQ9H788 454 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 POLD4Q9HCU8 107 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 PRR12Q9ULL5 1215 aa27.51■■□□□ 1.99
RAB40C-204ENST00000538492 PPIP5K2O43314 1243 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 KIF20AO95235 890 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 TDRD12Q587J7 1177 aaKnown RBP27.5■■□□□ 1.99
RAB40C-204ENST00000538492 CAGE1Q8TC20 777 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 CNKSR1Q969H4 720 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 LSM14BQ9BX40 385 aaKnown RBP27.5■■□□□ 1.99
RAB40C-204ENST00000538492 ANO9A1A5B4 782 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 FRMD3A2A2Y4 597 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 TBX3O15119 743 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 NOL4O94818 638 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 FOSP01100 380 aaPredicted RBP27.5■■□□□ 1.99
RAB40C-204ENST00000538492 RPA1P27694 616 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 GIT2Q14161 759 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 C7orf43Q8WVR3 580 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 REEP2Q9BRK0 252 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.5■■□□□ 1.99
RAB40C-204ENST00000538492 L1RE1Q9UN81 338 aa27.5■■□□□ 1.99
RAB40C-204ENST00000538492 PITPNM2Q9BZ72 1349 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 CLRN2A0PK11 232 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 ZNF76P36508 570 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 SLC30A10Q6XR72 485 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 TRIM59Q8IWR1 403 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 ANKRD13CQ8N6S4 541 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 LCA5LO95447 670 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 POLR2FP61218 127 aaKnown RBP27.49■■□□□ 1.99
RAB40C-204ENST00000538492 FAM83BQ5T0W9 1011 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 HDXQ7Z353 690 aa27.49■■□□□ 1.99
RAB40C-204ENST00000538492 PDE2AO00408 941 aaPredicted RBP27.48■■□□□ 1.99
RAB40C-204ENST00000538492 KIAA1755Q5JYT7 1200 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 HGSNATQ68CP4 663 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 TRIM58Q8NG06 486 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 CEP72Q9P209 647 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 SLC26A4O43511 780 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 TACC1O75410 805 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 GNA14O95837 355 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 MAGEA1P43355 309 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 MMP14P50281 582 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 MCTP2Q6DN12 878 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 SFR1Q86XK3 245 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 SYT2Q8N9I0 419 aaPredicted RBP27.48■■□□□ 1.99
RAB40C-204ENST00000538492 ACER1Q8TDN7 264 aa27.48■■□□□ 1.99
RAB40C-204ENST00000538492 C21orf2O43822 256 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 NR2F2P24468 414 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 USP14P54578 494 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 BTNL9Q6UXG8 535 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 FAM20AQ96MK3 541 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 BCAS3Q9H6U6 928 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 H3BQF6 201 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 CKAP4Q07065 602 aaKnown RBP27.47■■□□□ 1.99
RAB40C-204ENST00000538492 TBC1D5Q92609 795 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 BHMT2Q9H2M3 363 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 VAV3Q9UKW4 847 aa27.47■■□□□ 1.99
RAB40C-204ENST00000538492 RSPH10B2B2RC85 870 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 TLR2O60603 784 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 RSPH10BP0C881 870 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 STAT2P52630 851 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 ASTE1Q2TB18 679 aaPredicted RBP27.46■■□□□ 1.99
RAB40C-204ENST00000538492 EDEM3Q9BZQ6 932 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 PDE11AQ9HCR9 933 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 RGL1Q9NZL6 768 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 SALL4Q9UJQ4 1053 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 JRKLQ9Y4A0 524 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 CFBP00751 764 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 EPS15P42566 896 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 MARSP56192 900 aaKnown RBP27.46■■□□□ 1.99
RAB40C-204ENST00000538492 RASSF7Q02833 373 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 SFMBT2Q5VUG0 894 aa27.46■■□□□ 1.99
RAB40C-204ENST00000538492 SAMD1Q6SPF0 538 aaPredicted RBP27.46■■□□□ 1.99
RAB40C-204ENST00000538492 EML1O00423 815 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 CETN3O15182 167 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 CIITAP33076 1130 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 ARID5AQ03989 594 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 WDR93Q6P2C0 686 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.45■■□□□ 1.98
RAB40C-204ENST00000538492 PRPF6O94906 941 aaKnown RBP27.45■■□□□ 1.98
RAB40C-204ENST00000538492 MYBP10242 640 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 CCDC174Q6PII3 467 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 PSMB7Q99436 277 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 SNX12Q9UMY4 172 aa27.45■■□□□ 1.98
RAB40C-204ENST00000538492 ERICH4A6NGS2 130 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 GYS2P54840 703 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 KCNH2Q12809 1159 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 ENOX2Q16206 610 aaKnown RBP27.44■■□□□ 1.98
RAB40C-204ENST00000538492 EDRF1Q3B7T1 1238 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 SLC9C1Q4G0N8 1177 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 GBP3Q9H0R5 595 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 ZMYND10O75800 440 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 HOXD13P35453 343 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 UBXN2AP68543 259 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 C2orf54Q08AI8 447 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 EIF2AK1Q9BQI3 630 aaKnown RBP27.44■■□□□ 1.98
RAB40C-204ENST00000538492 RUSC1Q9BVN2 902 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 TMOD2Q9NZR1 351 aa27.44■■□□□ 1.98
RAB40C-204ENST00000538492 SSU72P8A0A1W2PR75 194 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 MAPK8IP2Q13387 824 aaPredicted RBP27.43■■□□□ 1.98
RAB40C-204ENST00000538492 CASP8Q14790 479 aa27.43■■□□□ 1.98
RAB40C-204ENST00000538492 KNOP1Q1ED39 458 aaKnown RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms