RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ATP6V1G3Q96LB4 118 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 ALG1Q9BT22 464 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CNOT10Q9H9A5 744 aaKnown RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 CHPF2Q9P2E5 772 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CPSF2Q9P2I0 782 aaKnown RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 DDX20Q9UHI6 824 aaKnown RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 MKL2Q9ULH7 1088 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CAPN11Q9UMQ6 739 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 SNX12Q9UMY4 172 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 MAP3K2Q9Y2U5 619 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 LUC7L2Q9Y383 392 aaKnown RBP7.41□□□□□ -1.22
USP28-207ENST00000538475 DISP2A7MBM2 1401 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 CAMTA1Q9Y6Y1 1673 aa7.41□□□□□ -1.22
USP28-207ENST00000538475 AKAP11Q9UKA4 1901 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 KLF18A0A0U1RQI7 1052 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 A0A1W2PQJ5 194 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 GMNCA6NCL1 334 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 GOLGA8BA8MQT2 603 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 N4BP3O15049 544 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 SNUPNO95149 360 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 MYL1P05976 194 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 FESP07332 822 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 PECAM1P16284 738 aaPredicted RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 ALAS2P22557 587 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 GSK3AP49840 483 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 DNM2P50570 870 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 CCNG1P51959 295 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 COPB1P53618 953 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 ERVK-24P63145 666 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 SNRPNP63162 240 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 GUCY1B3Q02153 619 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 TBC1D8BQ0IIM8 1120 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 MTMR3Q13615 1198 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 COL9A3Q14050 684 aaPredicted RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 GRIN2CQ14957 1233 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 TTF1Q15361 905 aaPredicted RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 SDCCAG8Q86SQ7 713 aaPredicted RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 MFN1Q8IWA4 741 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 CACNA2D3Q8IZS8 1091 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 RNF10Q8N5U6 811 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 ZFAND2BQ8WV99 257 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 LRRC45Q96CN5 670 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 NEUROD6Q96NK8 337 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 NUP88Q99567 741 aaPredicted RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 SLC30A3Q99726 388 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 PAIP2Q9BPZ3 127 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 PLCD4Q9BRC7 762 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 EDEM3Q9BZQ6 932 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 NCOA5Q9HCD5 579 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 CD248Q9HCU0 757 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 PLCB1Q9NQ66 1216 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 GDF3Q9NR23 364 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 DDX21Q9NR30 783 aaKnown RBP eCLIP7.4□□□□□ -1.22
USP28-207ENST00000538475 SAMSN1Q9NSI8 373 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 CWC25Q9NXE8 425 aaPredicted RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 KLK14Q9P0G3 267 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 CTNNAL1Q9UBT7 734 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 KLF15Q9UIH9 416 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 DBNLQ9UJU6 430 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 FBXO2Q9UK22 296 aaPredicted RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 PA2G4Q9UQ80 394 aaKnown RBP7.4□□□□□ -1.22
USP28-207ENST00000538475 HYOU1Q9Y4L1 999 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 ACEP12821 1306 aa7.4□□□□□ -1.22
USP28-207ENST00000538475 KIF1AQ12756 1690 aa7.4□□□□□ -1.23
USP28-207ENST00000538475 DIP2BQ9P265 1576 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 PRR36Q9H6K5 1346 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 KIF28PB7ZC32 967 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 TGFBR3LH3BV60 316 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 PIK3R2O00459 728 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 IFIT3O14879 490 aaKnown RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 TEX33O43247 280 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 PRC1O43663 620 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 LCA5LO95447 670 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 MARCKSP29966 332 aaPredicted RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 CDC27P30260 824 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 HNRNPH3P31942 346 aaKnown RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 HSPA9P38646 679 aaKnown RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 LIFRP42702 1097 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 FXR1P51114 621 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP28-207ENST00000538475 ZBED6P86452 979 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 TEFQ10587 303 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 KIF5AQ12840 1032 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 BIRC2Q13490 618 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 DGKZQ13574 1117 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 ITIH4Q14624 930 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 AMOTQ4VCS5 1084 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 TTMPQ5BVD1 217 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 ANKRD20A8PQ5CZ79 823 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 AKAP4Q5JQC9 854 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 RNF187Q5TA31 235 aaPredicted RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 GKAP1Q5VSY0 366 aaPredicted RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 CCDC129Q6ZRS4 1044 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 EP400NLQ6ZTU2 488 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 CHSY3Q70JA7 882 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 RAB44Q7Z6P3 723 aaPredicted RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 RALYLQ86SE5 291 aaKnown RBP7.39□□□□□ -1.23
USP28-207ENST00000538475 SGMS1Q86VZ5 419 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
USP28-207ENST00000538475 CCDC82Q8N4S0 544 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms