RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 SMIM10L2BP0DMW5 78 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 GHRP10912 638 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 RBM10P98175 930 aaKnown RBP10.78□□□□□ -0.68
USP28-205ENST00000537706 ATAT1Q5SQI0 421 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 SPATA33Q96N06 139 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 NGRNQ9NPE2 291 aaKnown RBP10.78□□□□□ -0.68
USP28-205ENST00000537706 STX8Q9UNK0 236 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 TPRP12270 2363 aaKnown RBP10.78□□□□□ -0.68
USP28-205ENST00000537706 TREHO43280 583 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 IFIT2P09913 472 aaKnown RBP10.78□□□□□ -0.68
USP28-205ENST00000537706 BMS1Q14692 1282 aaKnown RBP10.78□□□□□ -0.68
USP28-205ENST00000537706 PLPP4Q5VZY2 271 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 SUMF1Q8NBK3 374 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 CLEC4DQ8WXI8 215 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 FTHL17Q9BXU8 183 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 ENTPD7Q9NQZ7 604 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 DUSP12Q9UNI6 340 aa10.78□□□□□ -0.68
USP28-205ENST00000537706 MYO7AQ13402 2215 aa10.77□□□□□ -0.69
USP28-205ENST00000537706 HOXD8P13378 290 aaPredicted RBP10.77□□□□□ -0.69
USP28-205ENST00000537706 TFAP4Q01664 338 aa10.77□□□□□ -0.69
USP28-205ENST00000537706 C1orf210Q8IVY1 113 aa10.77□□□□□ -0.69
USP28-205ENST00000537706 CLASRPQ8N2M8 674 aaKnown RBP10.77□□□□□ -0.69
USP28-205ENST00000537706 DDX1Q92499 740 aaKnown RBP10.77□□□□□ -0.69
USP28-205ENST00000537706 GPR20Q99678 358 aa10.77□□□□□ -0.69
USP28-205ENST00000537706 GMEB2Q9UKD1 530 aa10.77□□□□□ -0.69
USP28-205ENST00000537706 PKD1L2Q7Z442 2459 aa10.77□□□□□ -0.69
USP28-205ENST00000537706 ATG2AQ2TAZ0 1938 aa10.77□□□□□ -0.69
USP28-205ENST00000537706 CCDC171Q6TFL3 1326 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 H3BRB1 525 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 FSCN2O14926 492 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 EIF3JO75822 258 aaKnown RBP10.76□□□□□ -0.69
USP28-205ENST00000537706 FGF18O76093 207 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 SLFN5Q08AF3 891 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 HIC1Q14526 733 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 ARHGEF16Q5VV41 709 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 XRRA1Q6P2D8 792 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 BTNL9Q6UXG8 535 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 OTOP3Q7RTS5 596 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 NETO1Q8TDF5 533 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 TUT1Q9H6E5 874 aaKnown RBP10.76□□□□□ -0.69
USP28-205ENST00000537706 WNT16Q9UBV4 365 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 LZTS1Q9Y250 596 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 WDR19Q8NEZ3 1342 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 EOMESO95936 686 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 APPP05067 770 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 GNAT2P19087 354 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 MCF2L2Q86YR7 1114 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 ATRIPQ8WXE1 791 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 RNPEPQ9H4A4 650 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 MLXIPQ9HAP2 919 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 DZANK1Q9NVP4 752 aa10.76□□□□□ -0.69
USP28-205ENST00000537706 ACACBO00763 2458 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 C5orf42Q9H799 3197 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 BAZ2AQ9UIF9 1905 aaKnown RBP10.75□□□□□ -0.69
USP28-205ENST00000537706 RPLP2P05387 115 aaKnown RBP10.75□□□□□ -0.69
USP28-205ENST00000537706 KCNA4P22459 653 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 HOXC8P31273 242 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 SLC16A2P36021 539 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 KCNC3Q14003 757 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 KIAA1841Q6NSI8 718 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 TAF2Q6P1X5 1199 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 TSHZ1Q6ZSZ6 1077 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 FAM9BQ8IZU0 186 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 TCF25Q9BQ70 676 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 NACAP1Q9BZK3 213 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 ZNF215Q9UL58 517 aaPredicted RBP10.75□□□□□ -0.69
USP28-205ENST00000537706 MYH4Q9Y623 1939 aa10.75□□□□□ -0.69
USP28-205ENST00000537706 TSPY2A6NKD2 308 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 NOP56O00567 594 aaKnown RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 SCG2P13521 617 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 ERVFC1P60507 584 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 ARHGAP4P98171 946 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 LPIN1Q14693 890 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 ZNF528Q3MIS6 628 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 CELF3Q5SZQ8 465 aaKnown RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 RARS2Q5T160 578 aaKnown RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 STRBPQ96SI9 672 aaKnown RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 RMDN3Q96TC7 470 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 OSBPL7Q9BZF2 842 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 EHMT1Q9H9B1 1298 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 TBC1D17Q9HA65 648 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 IGSF9Q9P2J2 1179 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 PCDHB7Q9Y5E2 793 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 GSG1L2A8MUP6 293 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 SLC30A4O14863 429 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 GGPS1O95749 300 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 HOXB3P14651 431 aaPredicted RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 LAG3P18627 525 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 KRT17Q04695 432 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
USP28-205ENST00000537706 FAM43BQ6ZT52 329 aaPredicted RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 MRPS27Q92552 414 aaKnown RBP10.74□□□□□ -0.69
USP28-205ENST00000537706 C16orf70Q9BSU1 422 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms