RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 UBOX5O94941 541 aa8.67□□□□□ -1.02
CCDC60-203ENST00000536742 COL2A1P02458 1487 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-203ENST00000536742 ZBTB48P10074 688 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-203ENST00000536742 CRY2Q49AN0 593 aa8.67□□□□□ -1.02
CCDC60-203ENST00000536742 CLEC4GQ6UXB4 293 aa8.67□□□□□ -1.02
CCDC60-203ENST00000536742 CKAP2LQ8IYA6 745 aa8.67□□□□□ -1.02
CCDC60-203ENST00000536742 BAHD1Q8TBE0 780 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-203ENST00000536742 U2AF1L4Q8WU68 220 aaKnown RBP8.67□□□□□ -1.02
CCDC60-203ENST00000536742 RTFDC1Q9BY42 306 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-203ENST00000536742 LRRC4CQ9HCJ2 640 aa8.67□□□□□ -1.02
CCDC60-203ENST00000536742 ZMYND8Q9ULU4 1186 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-203ENST00000536742 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
CCDC60-203ENST00000536742 GNAT3A8MTJ3 354 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 CLEC3AO75596 197 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-203ENST00000536742 ACRP10323 421 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 CCL5P13501 91 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-203ENST00000536742 RBL2Q08999 1139 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 KIAA2012Q0VF49 1180 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 KIF22Q14807 665 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 AMOTQ4VCS5 1084 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 C1orf141Q5JVX7 400 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 ANGEL2Q5VTE6 544 aaKnown RBP8.66□□□□□ -1.02
CCDC60-203ENST00000536742 UNC5AQ6ZN44 842 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 ARMC9Q7Z3E5 817 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 TTC6Q86TZ1 520 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 CDH24Q86UP0 819 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 C7orf61Q8IZ16 206 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 PIWIL2Q8TC59 973 aaKnown RBP8.66□□□□□ -1.02
CCDC60-203ENST00000536742 RPGRQ92834 1020 aaKnown RBP8.66□□□□□ -1.02
CCDC60-203ENST00000536742 BSDC1Q9NW68 430 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-203ENST00000536742 ACTR10Q9NZ32 417 aa8.66□□□□□ -1.02
CCDC60-203ENST00000536742 A0A1W2PQH9 124 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 CAMTA2O94983 1202 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 SGPL1O95470 568 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 TAL1P17542 331 aaPredicted RBP8.65□□□□□ -1.02
CCDC60-203ENST00000536742 ETFBP38117 255 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 PMS1P54277 932 aaKnown RBP8.65□□□□□ -1.02
CCDC60-203ENST00000536742 UBXN2AP68543 259 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 MRPS5P82675 430 aaKnown RBP8.65□□□□□ -1.02
CCDC60-203ENST00000536742 MSMPQ1L6U9 139 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 ZNF530Q6P9A1 599 aaPredicted RBP8.65□□□□□ -1.02
CCDC60-203ENST00000536742 KREMEN1Q96MU8 473 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 SUCOQ9UBS9 1254 aaKnown RBP8.65□□□□□ -1.02
CCDC60-203ENST00000536742 KCNH3Q9ULD8 1083 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 ZNF652Q9Y2D9 606 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 MRVI1Q9Y6F6 885 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 CACNA1GO43497 2377 aa8.65□□□□□ -1.02
CCDC60-203ENST00000536742 SMAD7O15105 426 aaKnown RBP8.64□□□□□ -1.03
CCDC60-203ENST00000536742 GTF2F1P35269 517 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC60-203ENST00000536742 NECAB2Q7Z6G3 386 aa8.64□□□□□ -1.03
CCDC60-203ENST00000536742 FAM169BQ8N8A8 192 aa8.64□□□□□ -1.03
CCDC60-203ENST00000536742 RIN3Q8TB24 985 aa8.64□□□□□ -1.03
CCDC60-203ENST00000536742 HEXIM2Q96MH2 286 aaKnown RBP8.64□□□□□ -1.03
CCDC60-203ENST00000536742 SLC6A18Q96N87 628 aa8.64□□□□□ -1.03
CCDC60-203ENST00000536742 CRAMP1Q96RY5 1269 aa8.64□□□□□ -1.03
CCDC60-203ENST00000536742 CCDC39Q9UFE4 941 aa8.64□□□□□ -1.03
CCDC60-203ENST00000536742 LAMB1P07942 1786 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 YDJCA8MPS7 323 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 PSMD14O00487 310 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 TFRCP02786 760 aaKnown RBP8.63□□□□□ -1.03
CCDC60-203ENST00000536742 SYN1P17600 705 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 POLR2BP30876 1174 aaKnown RBP8.63□□□□□ -1.03
CCDC60-203ENST00000536742 PPP2R5EQ16537 467 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 FXNQ16595 210 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 RUFY4Q6ZNE9 571 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 VSIG10LQ86VR7 867 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 TP53INP2Q8IXH6 220 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 MFSD4AQ8N468 514 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 VWCEQ96DN2 955 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 RBM17Q96I25 401 aaKnown RBP8.63□□□□□ -1.03
CCDC60-203ENST00000536742 TEX13AQ9BXU3 409 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-203ENST00000536742 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 PRR13Q9NZ81 148 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 THEGQ9P2T0 379 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 ZNF214Q9UL59 606 aaPredicted RBP8.63□□□□□ -1.03
CCDC60-203ENST00000536742 SNX11Q9Y5W9 270 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 SSC5DA1L4H1 1573 aa8.63□□□□□ -1.03
CCDC60-203ENST00000536742 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 TCERG1O14776 1098 aaKnown RBP8.62□□□□□ -1.03
CCDC60-203ENST00000536742 PRNPP04156 253 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 CEACAM5P06731 702 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 CLCN7P51798 805 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 OXCT1P55809 520 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 NHLH1Q02575 133 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 NCAPHQ15003 741 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 NBPF12Q5TAG4 269 aaPredicted RBP8.62□□□□□ -1.03
CCDC60-203ENST00000536742 DPP8Q6V1X1 898 aaPredicted RBP8.62□□□□□ -1.03
CCDC60-203ENST00000536742 ANKS3Q6ZW76 656 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 TMEM192Q8IY95 271 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 PUS7Q96PZ0 661 aaKnown RBP8.62□□□□□ -1.03
CCDC60-203ENST00000536742 ATP6V0A2Q9Y487 856 aa8.62□□□□□ -1.03
CCDC60-203ENST00000536742 ASTN2O75129 1339 aaPredicted RBP8.61□□□□□ -1.03
CCDC60-203ENST00000536742 KLF4O43474 513 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 WDHD1O75717 1129 aaPredicted RBP8.61□□□□□ -1.03
CCDC60-203ENST00000536742 HOXD10P28358 340 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 TXKP42681 527 aa8.61□□□□□ -1.03
CCDC60-203ENST00000536742 IFI16Q16666 785 aaKnown RBP8.61□□□□□ -1.03
CCDC60-203ENST00000536742 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms