RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TMEFF1Q8IYR6 380 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 TSPAN17Q96FV3 270 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 PEX11GQ96HA9 241 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 TMEM169Q96HH4 297 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 SIGLEC10Q96LC7 697 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 DNAJC7Q99615 494 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 EPB41L4AQ9HCS5 686 aaPredicted RBP8.03□□□□□ -1.12
CLIP1-207ENST00000536634 CNOT6Q9ULM6 557 aaKnown RBP8.03□□□□□ -1.12
CLIP1-207ENST00000536634 KCTD3Q9Y597 815 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 IRAK3Q9Y616 596 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 X6R8D5 127 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 EHBP1L1Q8N3D4 1523 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 KDM2BQ8NHM5 1336 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 GTF2A2P52657 109 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 IFRD2Q12894 506 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-207ENST00000536634 LSAMPQ13449 338 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 FAM209AQ5JX71 171 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 ZBTB38Q8NAP3 1195 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-207ENST00000536634 MKL1Q969V6 931 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 TRMT2BQ96GJ1 504 aaKnown RBP8.02□□□□□ -1.13
CLIP1-207ENST00000536634 CHAMP1Q96JM3 812 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 DRC1Q96MC2 740 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 TOX2Q96NM4 488 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 OSBPL2Q9H1P3 480 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 CDIP1Q9H305 208 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 GPR27Q9NS67 375 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 PPARGC1AQ9UBK2 798 aaKnown RBP8.02□□□□□ -1.13
CLIP1-207ENST00000536634 NUDT5Q9UKK9 219 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 CEP162Q5TB80 1403 aa8.02□□□□□ -1.13
CLIP1-207ENST00000536634 PIK3C2BO00750 1634 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 COL16A1Q07092 1604 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-207ENST00000536634 NUAK1O60285 661 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 BUB1BO60566 1050 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-207ENST00000536634 ASGR2P07307 311 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 ATF2P15336 505 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 IGFBP6P24592 240 aaPredicted RBP8.01□□□□□ -1.13
CLIP1-207ENST00000536634 PMLP29590 882 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 MC3RP41968 323 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 RIOX2Q8IUF8 465 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 ALG3Q92685 438 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 EXOC2Q96KP1 924 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 CLDND1Q9NY35 253 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 ARHGEF5Q12774 1597 aa8.01□□□□□ -1.13
CLIP1-207ENST00000536634 LRRC9Q6ZRR7 1453 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 JCADQ9P266 1359 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 PRDM15P57071 1507 aaPredicted RBP8□□□□□ -1.13
CLIP1-207ENST00000536634 SGSM2O43147 1006 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 MROH9Q5TGP6 573 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 DCP2Q8IU60 420 aaKnown RBP8□□□□□ -1.13
CLIP1-207ENST00000536634 DCAF4Q8WV16 495 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 CDC6Q99741 560 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 IRF2BPLQ9H1B7 796 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 NWD1Q149M9 1564 aa8□□□□□ -1.13
CLIP1-207ENST00000536634 EIF2AK4Q9P2K8 1649 aaKnown RBP8□□□□□ -1.13
CLIP1-207ENST00000536634 TET3O43151 1660 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 TRBV23-1A0A0A0MS06 115 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 H7BY64 318 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 LIMS1P48059 325 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 BMS1Q14692 1282 aaKnown RBP7.99□□□□□ -1.13
CLIP1-207ENST00000536634 SLC9A5Q14940 896 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 CIAPIN1Q6FI81 312 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 STYK1Q6J9G0 422 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 RSPO2Q6UXX9 243 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-207ENST00000536634 SCUBE1Q8IWY4 988 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
CLIP1-207ENST00000536634 TMEM2Q9UHN6 1383 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 ZBTB7AO95365 584 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 KCNA6P17658 529 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 SLC6A11P48066 632 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 RBM10P98175 930 aaKnown RBP7.98□□□□□ -1.13
CLIP1-207ENST00000536634 LCNL1Q6ZST4 164 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 FAM129CQ86XR2 697 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 SEC14L1Q92503 715 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 JAM3Q9BX67 310 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 AP5M1Q9H0R1 490 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 PALD1Q9ULE6 856 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 COA3Q9Y2R0 106 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-207ENST00000536634 TRAF6Q9Y4K3 522 aa7.98□□□□□ -1.13
CLIP1-207ENST00000536634 MAST1Q9Y2H9 1570 aa7.97□□□□□ -1.13
CLIP1-207ENST00000536634 C6orf222P0C671 652 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-207ENST00000536634 PFKLP17858 780 aa7.97□□□□□ -1.13
CLIP1-207ENST00000536634 TARBP2Q15633 366 aaKnown RBP7.97□□□□□ -1.13
CLIP1-207ENST00000536634 ZNF385BQ569K4 471 aa7.97□□□□□ -1.13
CLIP1-207ENST00000536634 LBX2Q6XYB7 198 aa7.97□□□□□ -1.13
CLIP1-207ENST00000536634 LNPKQ9C0E8 428 aa7.97□□□□□ -1.13
CLIP1-207ENST00000536634 RNF38Q9H0F5 515 aa7.97□□□□□ -1.13
CLIP1-207ENST00000536634 NKTRP30414 1462 aaKnown RBP7.97□□□□□ -1.13
CLIP1-207ENST00000536634 KDM5AP29375 1690 aaKnown RBP7.96□□□□□ -1.13
CLIP1-207ENST00000536634 SHPRHQ149N8 1683 aa7.96□□□□□ -1.13
CLIP1-207ENST00000536634 RFXAPO00287 272 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 NCAM1P13591 858 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 GPR85P60893 370 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 SUMO1P63165 101 aaKnown RBP7.96□□□□□ -1.14
CLIP1-207ENST00000536634 CNKSR3Q6P9H4 555 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 LILRB2Q8N423 598 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 ZSCAN18Q8TBC5 510 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-207ENST00000536634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.96□□□□□ -1.14
CLIP1-207ENST00000536634 UBXN4Q92575 508 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 DACT3Q96B18 629 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-207ENST00000536634 ZFYVE21Q9BQ24 234 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms