RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 PRKCSHP14314 528 aaPredicted RBP25.21■■□□□ 1.63
HMGA2-206ENST00000536545 MUTP22033 750 aa25.21■■□□□ 1.63
HMGA2-206ENST00000536545 DNM2P50570 870 aa25.21■■□□□ 1.63
HMGA2-206ENST00000536545 RPS6P62753 249 aaKnown RBP25.21■■□□□ 1.63
HMGA2-206ENST00000536545 HERC4Q5GLZ8 1057 aaPredicted RBP25.21■■□□□ 1.63
HMGA2-206ENST00000536545 TRERF1Q96PN7 1200 aa25.21■■□□□ 1.63
HMGA2-206ENST00000536545 TSG101Q99816 390 aa25.21■■□□□ 1.63
HMGA2-206ENST00000536545 RNF181Q9P0P0 153 aa25.21■■□□□ 1.63
HMGA2-206ENST00000536545 POLR2AP24928 1970 aaKnown RBP25.2■■□□□ 1.63
HMGA2-206ENST00000536545 OTOFQ9HC10 1997 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 SLITRK3O94933 977 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 FGFR1OPO95684 399 aaKnown RBP25.2■■□□□ 1.62
HMGA2-206ENST00000536545 DSG3P32926 999 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 MTIF2P46199 727 aaKnown RBP25.2■■□□□ 1.62
HMGA2-206ENST00000536545 OAZ1P54368 228 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 RAD51AP2Q09MP3 1159 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 CTTNQ14247 550 aaKnown RBP25.2■■□□□ 1.62
HMGA2-206ENST00000536545 CPLX3Q8WVH0 158 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 RUSC1Q9BVN2 902 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 BHMT2Q9H2M3 363 aa25.2■■□□□ 1.62
HMGA2-206ENST00000536545 UTRNP46939 3433 aa25.19■■□□□ 1.62
HMGA2-206ENST00000536545 MRPS9P82933 396 aaKnown RBP25.19■■□□□ 1.62
HMGA2-206ENST00000536545 SCFD1Q8WVM8 642 aa25.19■■□□□ 1.62
HMGA2-206ENST00000536545 RNF146Q9NTX7 359 aa25.19■■□□□ 1.62
HMGA2-206ENST00000536545 TBC1D7Q9P0N9 293 aa25.19■■□□□ 1.62
HMGA2-206ENST00000536545 AFG3L2Q9Y4W6 797 aa25.19■■□□□ 1.62
HMGA2-206ENST00000536545 LOC285556D6RIA3 1793 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 USP2O75604 605 aaPredicted RBP25.18■■□□□ 1.62
HMGA2-206ENST00000536545 EPHA7Q15375 998 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 TKFCQ3LXA3 575 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 TOGARAM2Q6ZUX3 1019 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 REXO1L1PQ8IX06 675 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 TAAR1Q96RJ0 339 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 KCNH7Q9NS40 1196 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 PPP2R2CQ9Y2T4 447 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 RNF225M0QZC1 329 aaPredicted RBP25.18■■□□□ 1.62
HMGA2-206ENST00000536545 NKRFO15226 690 aaKnown RBP eCLIP25.18■■□□□ 1.624e-8■□□□□ 8.1
HMGA2-206ENST00000536545 RNF207Q6ZRF8 634 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 JADE2Q9NQC1 790 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 ABHD10Q9NUJ1 306 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 ZNF214Q9UL59 606 aaPredicted RBP25.18■■□□□ 1.62
HMGA2-206ENST00000536545 RIPK3Q9Y572 518 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 SNCAIPQ9Y6H5 919 aa25.18■■□□□ 1.62
HMGA2-206ENST00000536545 ZSCAN12O43309 604 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 KIF20AO95235 890 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 GTF2F1P35269 517 aaKnown RBP eCLIP25.17■■□□□ 1.622e-9■■■□□ 16.1
HMGA2-206ENST00000536545 PGM5Q15124 567 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 CATSPERGQ6ZRH7 1159 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 SFR1Q86XK3 245 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 TPH2Q8IWU9 490 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 ZC3H3Q8IXZ2 948 aaKnown RBP25.17■■□□□ 1.62
HMGA2-206ENST00000536545 NEK9Q8TD19 979 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 NOC4LQ9BVI4 516 aaKnown RBP25.17■■□□□ 1.62
HMGA2-206ENST00000536545 KCTD10Q9H3F6 313 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 AGO4Q9HCK5 861 aaKnown RBP25.17■■□□□ 1.62
HMGA2-206ENST00000536545 TMOD4Q9NZQ9 345 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 PAXBP1Q9Y5B6 917 aa25.17■■□□□ 1.62
HMGA2-206ENST00000536545 SOWAHDA6NJG2 315 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 PES1O00541 588 aaKnown RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 DHX15O43143 795 aaKnown RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 YBX3P16989 372 aaKnown RBP eCLIP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 EIF2AK2P19525 551 aaKnown RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 SH3D19Q5HYK7 790 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 EPM2AIP1Q7L775 607 aaPredicted RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 PXMP2Q9NR77 195 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 WRAP73Q9P2S5 460 aaPredicted RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 PTPRFP10586 1907 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 RIOK3O14730 519 aaKnown RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 ATP2A1O14983 1001 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 ITGB3BPQ13352 177 aaPredicted RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 VGLL4Q14135 290 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 COG2Q14746 738 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 MTF1Q14872 753 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 RINT1Q6NUQ1 792 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.16■■□□□ 1.62
HMGA2-206ENST00000536545 PIGOQ8TEQ8 1089 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 ERGIC2Q96RQ1 377 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 PDCD2LQ9BRP1 358 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 TTYH3Q9C0H2 523 aa25.16■■□□□ 1.62
HMGA2-206ENST00000536545 MYPNQ86TC9 1320 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 LOXHD1Q8IVV2 1947 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 CASP5P51878 434 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 FKBP3Q00688 224 aaKnown RBP25.15■■□□□ 1.62
HMGA2-206ENST00000536545 PRKG1Q13976 671 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 MAN2A1Q16706 1144 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 SNRNP48Q6IEG0 339 aaKnown RBP25.15■■□□□ 1.62
HMGA2-206ENST00000536545 RAD9BQ6WBX8 426 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 NSMFQ6X4W1 530 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 CEP63Q96MT8 703 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 RMDN3Q96TC7 470 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 SYT17Q9BSW7 474 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 ZHX3Q9H4I2 956 aa25.15■■□□□ 1.62
HMGA2-206ENST00000536545 TTC26A0AVF1 554 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 RSPH10B2B2RC85 870 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 ADM5C9JUS6 153 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 TBCAO75347 108 aaKnown RBP25.14■■□□□ 1.62
HMGA2-206ENST00000536545 RSPH10BP0C881 870 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 TBC1D8BQ0IIM8 1120 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 MTMR1Q13613 665 aa25.14■■□□□ 1.62
HMGA2-206ENST00000536545 TMEM132BQ14DG7 1078 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms