RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 RGL1Q9NZL6 768 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 HPSEQ9Y251 543 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 CASP8AP2Q9UKL3 1982 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 DOCK5Q9H7D0 1870 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 A0A087WWV3 80 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 POLR2DO15514 142 aaKnown RBP12.94□□□□□ -0.34
CDCA3-206ENST00000536241 ADCY6O43306 1168 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 TRAK2O60296 914 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 MED24O75448 989 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 SLITRK3O94933 977 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 HSPA8P11142 646 aaKnown RBP12.94□□□□□ -0.34
CDCA3-206ENST00000536241 CCT6AP40227 531 aaKnown RBP12.94□□□□□ -0.34
CDCA3-206ENST00000536241 SYKP43405 635 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 ACTR2P61160 394 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 KRT76Q01546 638 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 DUSP28Q4G0W2 176 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 ZNF746Q6NUN9 644 aaPredicted RBP12.94□□□□□ -0.34
CDCA3-206ENST00000536241 CATSPER3Q86XQ3 398 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 TPH2Q8IWU9 490 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 ERMNQ8TAM6 284 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 HSD17B14Q9BPX1 270 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 TCEAL9Q9UHQ7 104 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 FAM184BQ9ULE4 1060 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 LRRC37A2A6NM11 1700 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 PCNTO95613 3336 aa12.94□□□□□ -0.34
CDCA3-206ENST00000536241 GSTTP1A0A1W2PQM5 241 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 ATG7O95352 703 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 GH1P01241 217 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 HSPA1AP0DMV8 641 aaKnown RBP12.93□□□□□ -0.34
CDCA3-206ENST00000536241 HSPA1BP0DMV9 641 aaKnown RBP12.93□□□□□ -0.34
CDCA3-206ENST00000536241 CYBAP13498 195 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 CNGA1P29973 690 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 TXLNAP40222 546 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 LBX1P52954 281 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 CYP4A11Q02928 519 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 FAM160A1Q05DH4 1040 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 GRB10Q13322 594 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 LAMC2Q13753 1193 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 CTTNQ14247 550 aaKnown RBP12.93□□□□□ -0.34
CDCA3-206ENST00000536241 SKOR2Q2VWA4 1001 aaPredicted RBP12.93□□□□□ -0.34
CDCA3-206ENST00000536241 HSDL1Q3SXM5 330 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 RRAGBQ5VZM2 374 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 FMR1NBQ8N0W7 255 aaPredicted RBP12.93□□□□□ -0.34
CDCA3-206ENST00000536241 RASSF8Q8NHQ8 419 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 CALML4Q96GE6 196 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 DACT1Q9NYF0 836 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 CCDC39Q9UFE4 941 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 PTPN22Q9Y2R2 807 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 PCDHA10Q9Y5I2 948 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
CDCA3-206ENST00000536241 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 WDR64B1ANS9 1081 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-206ENST00000536241 MBD3O95983 291 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 HMGCRP04035 888 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 RPA1P27694 616 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 SFNP31947 248 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 GRK4P32298 578 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 JAK3P52333 1124 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 ARHGAP1Q07960 439 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 LONRF3Q496Y0 759 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 SWSAP1Q6NVH7 229 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 ABHD15Q6UXT9 468 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-206ENST00000536241 BANK1Q8NDB2 785 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 SEPT1Q8WYJ6 367 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 DHX58Q96C10 678 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 POLR3CQ9BUI4 534 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-206ENST00000536241 SERTAD1Q9UHV2 236 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 NRBP1Q9UHY1 535 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 KIAA1024Q9UPX6 916 aa12.92□□□□□ -0.34
CDCA3-206ENST00000536241 GNEQ9Y223 722 aaKnown RBP12.92□□□□□ -0.34
CDCA3-206ENST00000536241 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 ZBTB39O15060 712 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 NKRFO15226 690 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 P4HBP07237 508 aaKnown RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 PSAPP07602 524 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 PLCG1P19174 1290 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 CCND3P30281 292 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 CTCFP49711 727 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 E2F4Q16254 413 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 HYIQ5T013 277 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 HAUS3Q68CZ6 603 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 MIS18BP1Q6P0N0 1132 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 TRMT1LQ7Z2T5 733 aaKnown RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 RDM1Q8NG50 284 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 LRRC15Q8TF66 581 aa12.91□□□□□ -0.34
CDCA3-206ENST00000536241 LENG1Q96BZ8 264 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-206ENST00000536241 GPR20Q99678 358 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms