RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 ARHGAP4P98171 946 aa15.03■□□□□ -0
RTN3-207ENST00000536011 HIC1Q14526 733 aa15.03■□□□□ -0
RTN3-207ENST00000536011 MBTPS1Q14703 1052 aa15.03■□□□□ -0
RTN3-207ENST00000536011 SKIV2LQ15477 1246 aaKnown RBP15.03■□□□□ -0
RTN3-207ENST00000536011 UBE2SQ16763 222 aa15.03■□□□□ -0
RTN3-207ENST00000536011 TAF2Q6P1X5 1199 aa15.03■□□□□ -0
RTN3-207ENST00000536011 TRIM50Q86XT4 487 aa15.03■□□□□ -0
RTN3-207ENST00000536011 APBB2Q92870 758 aa15.03■□□□□ -0
RTN3-207ENST00000536011 TNPO1Q92973 898 aaKnown RBP15.03■□□□□ -0
RTN3-207ENST00000536011 BCAS3Q9H6U6 928 aa15.03■□□□□ -0
RTN3-207ENST00000536011 CERS4Q9HA82 394 aa15.03■□□□□ -0
RTN3-207ENST00000536011 SETD4Q9NVD3 440 aa15.03■□□□□ -0
RTN3-207ENST00000536011 ERAP1Q9NZ08 941 aa15.03■□□□□ -0
RTN3-207ENST00000536011 PCDHA6Q9UN73 950 aa15.03■□□□□ -0
RTN3-207ENST00000536011 PCDHA8Q9Y5H6 950 aa15.03■□□□□ -0
RTN3-207ENST00000536011 MTCH2Q9Y6C9 303 aa15.03■□□□□ -0
RTN3-207ENST00000536011 REV3LO60673 3130 aa15.02■□□□□ -0
RTN3-207ENST00000536011 CCDC196A0A1B0GTZ2 297 aa15.02■□□□□ -0
RTN3-207ENST00000536011 GOLGA8AA7E2F4 631 aa15.02■□□□□ -0
RTN3-207ENST00000536011 GOLGA8BA8MQT2 603 aa15.02■□□□□ -0
RTN3-207ENST00000536011 KCNA2P16389 499 aa15.02■□□□□ -0
RTN3-207ENST00000536011 ITGB5P18084 799 aa15.02■□□□□ -0
RTN3-207ENST00000536011 ADCY7P51828 1080 aa15.02■□□□□ -0
RTN3-207ENST00000536011 PLEKHG4Q58EX7 1191 aa15.02■□□□□ -0
RTN3-207ENST00000536011 RSPH3Q86UC2 560 aa15.02■□□□□ -0
RTN3-207ENST00000536011 LMBR1Q8WVP7 490 aa15.02■□□□□ -0
RTN3-207ENST00000536011 SEPT1Q8WYJ6 367 aa15.02■□□□□ -0
RTN3-207ENST00000536011 GLG1Q92896 1179 aa15.02■□□□□ -0
RTN3-207ENST00000536011 TGS1Q96RS0 853 aaKnown RBP15.02■□□□□ -0
RTN3-207ENST00000536011 RIC8AQ9NPQ8 531 aa15.02■□□□□ -0
RTN3-207ENST00000536011 JADE2Q9NQC1 790 aa15.02■□□□□ -0
RTN3-207ENST00000536011 PRDM6Q9NQX0 595 aa15.02■□□□□ -0
RTN3-207ENST00000536011 INSL6Q9Y581 213 aa15.02■□□□□ -0
RTN3-207ENST00000536011 UBIAD1Q9Y5Z9 338 aa15.02■□□□□ -0
RTN3-207ENST00000536011 KLF18A0A0U1RQI7 1052 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 CTSHP09668 335 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 EXOSC10Q01780 885 aaKnown RBP15.01□□□□□ -0.01
RTN3-207ENST00000536011 PPFIA1Q13136 1202 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 COL9A3Q14050 684 aaPredicted RBP15.01□□□□□ -0.01
RTN3-207ENST00000536011 WWC2Q6AWC2 1192 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 MYOCDQ8IZQ8 938 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 DBF4BQ8NFT6 615 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 SDF4Q9BRK5 362 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 SMARCAD1Q9H4L7 1026 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 JPH1Q9HDC5 661 aaPredicted RBP15.01□□□□□ -0.01
RTN3-207ENST00000536011 LMCD1Q9NZU5 365 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 COG5Q9UP83 839 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 PTPRSQ13332 1948 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 DOCK5Q9H7D0 1870 aa15.01□□□□□ -0.01
RTN3-207ENST00000536011 LCHNA4D1U4 455 aa15□□□□□ -0.01
RTN3-207ENST00000536011 TNFRSF10AO00220 468 aa15□□□□□ -0.01
RTN3-207ENST00000536011 RFXAPO00287 272 aa15□□□□□ -0.01
RTN3-207ENST00000536011 GRB10Q13322 594 aa15□□□□□ -0.01
RTN3-207ENST00000536011 TMCO2Q7Z6W1 182 aaPredicted RBP15□□□□□ -0.01
RTN3-207ENST00000536011 RPAINQ86UA6 219 aa15□□□□□ -0.01
RTN3-207ENST00000536011 AZI2Q9H6S1 392 aa15□□□□□ -0.01
RTN3-207ENST00000536011 BARHL2Q9NY43 387 aa15□□□□□ -0.01
RTN3-207ENST00000536011 TUBE1Q9UJT0 475 aa15□□□□□ -0.01
RTN3-207ENST00000536011 NAP1L2Q9ULW6 460 aaPredicted RBP15□□□□□ -0.01
RTN3-207ENST00000536011 MICAL3Q7RTP6 2002 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 PRRC2BQ5JSZ5 2229 aaKnown RBP14.99□□□□□ -0.01
RTN3-207ENST00000536011 LINC01553A4QN01 128 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 EPOPA6NHQ4 379 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 ATP9AO75110 1047 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 ARHGEF15O94989 841 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 METAP2P50579 478 aaKnown RBP eCLIP14.99□□□□□ -0.01
RTN3-207ENST00000536011 ERVK-21P61565 698 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 ADAM17P78536 824 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 TCTN1Q2MV58 587 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 CEP55Q53EZ4 464 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 FAM26DQ5JW98 314 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 MCTP2Q6DN12 878 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 FAM117BQ6P1L5 589 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 ADAMTS19Q8TE59 1207 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 CCDC12Q8WUD4 166 aaPredicted RBP14.99□□□□□ -0.01
RTN3-207ENST00000536011 CCDC136Q96JN2 1154 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 TCEANC2Q96MN5 208 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 SAMD11Q96NU1 681 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 MXRA8Q9BRK3 442 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 IFIH1Q9BYX4 1025 aaKnown RBP14.99□□□□□ -0.01
RTN3-207ENST00000536011 KCNH7Q9NS40 1196 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 PKD2L1Q9P0L9 805 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 SLC9A2Q9UBY0 812 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 BRPF3Q9ULD4 1205 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 V9GY48 417 aaPredicted RBP14.99□□□□□ -0.01
RTN3-207ENST00000536011 COL4A4P53420 1690 aaPredicted RBP14.99□□□□□ -0.01
RTN3-207ENST00000536011 KAT6AQ92794 2004 aa14.99□□□□□ -0.01
RTN3-207ENST00000536011 NFASCO94856 1347 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 GSTTP1A0A1W2PQM5 241 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 SMCO2A6NFE2 343 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 RRN3P2A6NIE6 340 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 STXBP3O00186 592 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 REC8O95072 547 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 MARK3P27448 753 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 FUT2Q10981 343 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 GRIK4Q16099 956 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 ADCK5Q3MIX3 580 aa14.98□□□□□ -0.01
RTN3-207ENST00000536011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.98□□□□□ -0.019e-7■■■■□ 25.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms