RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 HDAC6Q9UBN7 1215 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 GTF2IRD1Q9UHL9 959 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 PCDHA6Q9UN73 950 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 NOD1Q9Y239 953 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 PCDHA8Q9Y5H6 950 aa10.14□□□□□ -0.79
CHD4-204ENST00000535810 TANC1Q9C0D5 1861 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 NOP56O00567 594 aaKnown RBP10.13□□□□□ -0.79
CHD4-204ENST00000535810 LGALS2P05162 132 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 FOSL2P15408 326 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 ADCY7P51828 1080 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 EVCP57679 992 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 BFSP2Q13515 415 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 PFKFB3Q16875 520 aaPredicted RBP10.13□□□□□ -0.79
CHD4-204ENST00000535810 RUFY3Q7L099 469 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 CYFIP1Q7L576 1253 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 NLRX1Q86UT6 975 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 MYLIPQ8WY64 445 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 GPR20Q99678 358 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 ALG1Q9BT22 464 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 TTYH1Q9H313 450 aaPredicted RBP10.13□□□□□ -0.79
CHD4-204ENST00000535810 CXXC1Q9P0U4 656 aaPredicted RBP10.13□□□□□ -0.79
CHD4-204ENST00000535810 TELO2Q9Y4R8 837 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 UBIAD1Q9Y5Z9 338 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 PIEZO1Q92508 2521 aa10.13□□□□□ -0.79
CHD4-204ENST00000535810 BDP1A6H8Y1 2624 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 TMEM265A0A087WTH1 108 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 SMCO2A6NFE2 343 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 H3BRB1 525 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 ATP9AO75110 1047 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 FGBP02675 491 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 PFKMP08237 780 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 IQCF3P0C7M6 154 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 SCG2P13521 617 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 KCNA2P16389 499 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 DNAJB2P25686 324 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 RFC2P35250 354 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 MLLT3P42568 568 aaPredicted RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 CLK2P49760 499 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 SP4Q02446 784 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 RBL2Q08999 1139 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 MTMR1Q13613 665 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 TOB2Q14106 344 aaPredicted RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 HIC1Q14526 733 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 NTRK3Q16288 839 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 PKN1Q16512 942 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 OTOP2Q7RTS6 562 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 TRIM50Q86XT4 487 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 RPUSD2Q8IZ73 545 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 DHX38Q92620 1227 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 PHKBQ93100 1093 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 CDHR1Q96JP9 859 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 PGBD1Q96JS3 809 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 ANO3Q9BYT9 981 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 UPF3BQ9BZI7 483 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 TM6SF1Q9BZW5 370 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 MTIF3Q9H2K0 278 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 TUT1Q9H6E5 874 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 EHMT1Q9H9B1 1298 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 NCOA5Q9HCD5 579 aaKnown RBP10.12□□□□□ -0.79
CHD4-204ENST00000535810 CYP46A1Q9Y6A2 500 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 NCOR1O75376 2440 aa10.12□□□□□ -0.79
CHD4-204ENST00000535810 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 ESYT2A0FGR8 921 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 GRXCR1A8MXD5 290 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 PRPF3O43395 683 aaKnown RBP10.11□□□□□ -0.79
CHD4-204ENST00000535810 PPFIA3O75145 1194 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 FOSP01100 380 aaPredicted RBP10.11□□□□□ -0.79
CHD4-204ENST00000535810 HOXC8P31273 242 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 SREBF1P36956 1147 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 ZNF200P98182 395 aaPredicted RBP10.11□□□□□ -0.79
CHD4-204ENST00000535810 AP3B2Q13367 1082 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 DEFB128Q7Z7B8 93 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 CCDC155Q8N6L0 562 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 RETREG2Q8NC44 543 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 GIMAP8Q8ND71 665 aaPredicted RBP10.11□□□□□ -0.79
CHD4-204ENST00000535810 CYP2W1Q8TAV3 490 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 WNT8BQ93098 351 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 RNF26Q9BY78 433 aaPredicted RBP10.11□□□□□ -0.79
CHD4-204ENST00000535810 PBX4Q9BYU1 374 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 ZMYND12Q9H0C1 365 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 GLT8D2Q9H1C3 349 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 JADE2Q9NQC1 790 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 TMEM260Q9NX78 707 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 PKD2L1Q9P0L9 805 aa10.11□□□□□ -0.79
CHD4-204ENST00000535810 TET1Q8NFU7 2136 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 MAFGO15525 162 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 SMIM10L2AP0DMW4 78 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 SMIM10L2BP0DMW5 78 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 CKBP12277 381 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 SELPP16109 830 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 IFNAR1P17181 557 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 PBX2P40425 430 aa10.1□□□□□ -0.79
CHD4-204ENST00000535810 CCT2P78371 535 aaKnown RBP10.1□□□□□ -0.79
CHD4-204ENST00000535810 PTK7Q13308 1070 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms