RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 C16orf70Q9BSU1 422 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 TMEM60Q9H2L4 133 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 PCDHB6Q9Y5E3 794 aa13.64□□□□□ -0.23
CHD4-203ENST00000535717 ATG7O95352 703 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 F2P00734 622 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 LGALS2P05162 132 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 KRT76Q01546 638 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 ORC2Q13416 577 aaPredicted RBP13.63□□□□□ -0.23
CHD4-203ENST00000535717 CALCRLQ16602 461 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 RILPL1Q5EBL4 403 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 UTP14CQ5TAP6 766 aaKnown RBP13.63□□□□□ -0.23
CHD4-203ENST00000535717 ZNF746Q6NUN9 644 aaPredicted RBP13.63□□□□□ -0.23
CHD4-203ENST00000535717 B3GNT9Q6UX72 402 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 TRIM50Q86XT4 487 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 MTMR9Q96QG7 549 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 PCYT2Q99447 389 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 TEKT3Q9BXF9 490 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 UNC45AQ9H3U1 944 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 SCN10AQ9Y5Y9 1956 aa13.63□□□□□ -0.23
CHD4-203ENST00000535717 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
CHD4-203ENST00000535717 HAS3O00219 553 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 CHMP2AO43633 222 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 MARCH6O60337 910 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 LGR5O75473 907 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 BAG4O95429 457 aaKnown RBP13.62□□□□□ -0.23
CHD4-203ENST00000535717 PSEN2P49810 448 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 CDK7P50613 346 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 CHMP4BP1P59074 171 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 ITGA7Q13683 1181 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 PKP1Q13835 747 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 SNX17Q15036 470 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 NBPF20Q3BBV1 942 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 ABHD15Q6UXT9 468 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 SLFN12Q8IYM2 578 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 C4orf32Q8N8J7 132 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 PPP1R13LQ8WUF5 828 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 TCEAL9Q9UHQ7 104 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
CHD4-203ENST00000535717 IGKV6D-21A0A0A0MT36 114 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 WDR64B1ANS9 1081 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 H3BRB1 525 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 ARVCFO00192 962 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 SUPT20HL2P0C7V6 817 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 ZSCAN22P10073 491 aaPredicted RBP13.61□□□□□ -0.23
CHD4-203ENST00000535717 PDIA4P13667 645 aaKnown RBP13.61□□□□□ -0.23
CHD4-203ENST00000535717 RTP1P59025 263 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 PPP2R5CQ13362 524 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 MFSD10Q14728 455 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 KIAA0753Q2KHM9 967 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 TRIM60Q495X7 471 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 C1orf53Q5VUE5 145 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 FOXD4L5Q5VV16 416 aaPredicted RBP13.61□□□□□ -0.23
CHD4-203ENST00000535717 MIS18BP1Q6P0N0 1132 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 FAM173BQ6P4H8 233 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 SMAP1Q8IYB5 467 aaPredicted RBP13.61□□□□□ -0.23
CHD4-203ENST00000535717 FOXD4L4Q8WXT5 416 aaPredicted RBP13.61□□□□□ -0.23
CHD4-203ENST00000535717 HTATIP2Q9BUP3 242 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 TUT1Q9H6E5 874 aaKnown RBP13.61□□□□□ -0.23
CHD4-203ENST00000535717 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.61□□□□□ -0.23
CHD4-203ENST00000535717 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 PCDHA10Q9Y5I2 948 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 EMSYQ7Z589 1322 aa13.61□□□□□ -0.23
CHD4-203ENST00000535717 ALPK3Q96L96 1907 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 EML1O00423 815 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 PSAPP07602 524 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 SFNP31947 248 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 ANP32AP39687 249 aaKnown RBP13.6□□□□□ -0.23
CHD4-203ENST00000535717 TXKP42681 527 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 JAK3P52333 1124 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 TLE2Q04725 743 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 SPIRE1Q08AE8 756 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 PTGDRQ13258 359 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 SWSAP1Q6NVH7 229 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 CCDC60Q8IWA6 550 aaPredicted RBP13.6□□□□□ -0.23
CHD4-203ENST00000535717 GLG1Q92896 1179 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 KATNAL1Q9BW62 490 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 SMARCAD1Q9H4L7 1026 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 ZSCAN16Q9H4T2 348 aaPredicted RBP13.6□□□□□ -0.23
CHD4-203ENST00000535717 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
CHD4-203ENST00000535717 ZNF215Q9UL58 517 aaPredicted RBP13.6□□□□□ -0.23
CHD4-203ENST00000535717 PCDHA12Q9UN75 941 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 ATP11BQ9Y2G3 1177 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 SAMM50Q9Y512 469 aa13.6□□□□□ -0.23
CHD4-203ENST00000535717 BACH1O14867 736 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
CHD4-203ENST00000535717 MARK3P27448 753 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 STAT5BP51692 787 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 NFRKBQ6P4R8 1299 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 PLPPR4Q7Z2D5 763 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 ANKRD33Q7Z3H0 272 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 AFAP1L1Q8TED9 768 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 DPF3Q92784 378 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 SEZ6LQ9BYH1 1024 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 RNPEPQ9H4A4 650 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 AZI2Q9H6S1 392 aa13.59□□□□□ -0.23
CHD4-203ENST00000535717 ZNF302Q9NR11 478 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms