RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
MSRB3-206ENST00000535664 PCNX4Q63HM2 1172 aa16.43■□□□□ 0.22
MSRB3-206ENST00000535664 PPP4R3AQ6IN85 833 aa16.43■□□□□ 0.22
MSRB3-206ENST00000535664 MOXD1Q6UVY6 613 aa16.43■□□□□ 0.22
MSRB3-206ENST00000535664 NLRX1Q86UT6 975 aa16.43■□□□□ 0.22
MSRB3-206ENST00000535664 PDLIM7Q9NR12 457 aa16.43■□□□□ 0.22
MSRB3-206ENST00000535664 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
MSRB3-206ENST00000535664 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
MSRB3-206ENST00000535664 DDX49Q9Y6V7 483 aaKnown RBP16.43■□□□□ 0.22
MSRB3-206ENST00000535664 PPFIA4O75335 1185 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 ICAM3P32942 547 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 CIITAP33076 1130 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 MCM7P33993 719 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 PURAQ00577 322 aaKnown RBP16.42■□□□□ 0.22
MSRB3-206ENST00000535664 FAAP100Q0VG06 881 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 NEDD9Q14511 834 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 LY6KQ17RY6 165 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
MSRB3-206ENST00000535664 NFRKBQ6P4R8 1299 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 TDHQ8IZJ6 230 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 PPTC7Q8NI37 304 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 KATNAL1Q9BW62 490 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 TMEM60Q9H2L4 133 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 PCDHA7Q9UN72 937 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
MSRB3-206ENST00000535664 SLC37A4O43826 429 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 CCNT1O60563 726 aaKnown RBP16.41■□□□□ 0.22
MSRB3-206ENST00000535664 TIMP1P01033 207 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 MYL3P08590 195 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 GCFC2P16383 781 aaKnown RBP16.41■□□□□ 0.22
MSRB3-206ENST00000535664 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
MSRB3-206ENST00000535664 ARHGAP1Q07960 439 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 PTGDRQ13258 359 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 FAM126BQ8IXS8 530 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 IL31RAQ8NI17 732 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 LENG9Q96B70 501 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 INPP4AQ96PE3 977 aaPredicted RBP16.41■□□□□ 0.22
MSRB3-206ENST00000535664 NAP1L4Q99733 375 aaKnown RBP16.41■□□□□ 0.22
MSRB3-206ENST00000535664 SENP7Q9BQF6 1050 aa16.41■□□□□ 0.22
MSRB3-206ENST00000535664 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 ARIH2O95376 493 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 CD4P01730 458 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 PTMSP20962 102 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 UBE2HP62256 183 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
MSRB3-206ENST00000535664 GRIN1Q05586 938 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 CELF3Q5SZQ8 465 aaKnown RBP16.4■□□□□ 0.22
MSRB3-206ENST00000535664 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 TMEM199Q8N511 208 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 AFG1LQ8WV93 481 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 GPRASP2Q96D09 838 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 MTMR9Q96QG7 549 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 MLXIPQ9HAP2 919 aa16.4■□□□□ 0.22
MSRB3-206ENST00000535664 SRPRBQ9Y5M8 271 aaKnown RBP16.4■□□□□ 0.22
MSRB3-206ENST00000535664 TRIM43BA6NCK2 446 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 LAD1O00515 517 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 NEMFO60524 1076 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 MMP3P08254 477 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 PRPHP41219 470 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 ME1P48163 572 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
MSRB3-206ENST00000535664 IL17AQ16552 155 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 LRIT3Q3SXY7 679 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 Q4G0T1 1027 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 TMEM63BQ5T3F8 832 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 ARL6IP4Q66PJ3 421 aaKnown RBP16.39■□□□□ 0.21
MSRB3-206ENST00000535664 ADALQ6DHV7 355 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 KRI1Q8N9T8 703 aaKnown RBP16.39■□□□□ 0.21
MSRB3-206ENST00000535664 GPT2Q8TD30 523 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 COPS5Q92905 334 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 BADQ92934 168 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 TRIM43Q96BQ3 446 aaPredicted RBP16.39■□□□□ 0.21
MSRB3-206ENST00000535664 TBX21Q9UL17 535 aa16.39■□□□□ 0.21
MSRB3-206ENST00000535664 A0A1W2PQ27 194 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 A0A1W2PQ64 194 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 A0A1W2PQD8 194 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 CUTAO60888 179 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 RGS20O76081 388 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 OR52Z1P0C646 297 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
MSRB3-206ENST00000535664 MFSD5Q6N075 450 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 GPR153Q6NV75 609 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 METTL7BQ6UX53 244 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 SESTD1Q86VW0 696 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 SPATA33Q96N06 139 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 KCNMB3Q9NPA1 279 aa16.38■□□□□ 0.21
MSRB3-206ENST00000535664 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
MSRB3-206ENST00000535664 CEP290O15078 2479 aa16.37■□□□□ 0.21
MSRB3-206ENST00000535664 FAM237AA0A1B0GTK4 181 aa16.37■□□□□ 0.21
MSRB3-206ENST00000535664 NOP56O00567 594 aaKnown RBP16.37■□□□□ 0.21
MSRB3-206ENST00000535664 GGPS1O95749 300 aa16.37■□□□□ 0.21
MSRB3-206ENST00000535664 HOXD8P13378 290 aaPredicted RBP16.37■□□□□ 0.21
MSRB3-206ENST00000535664 FPGSQ05932 587 aa16.37■□□□□ 0.21
MSRB3-206ENST00000535664 PPIGQ13427 754 aaKnown RBP eCLIP16.37■□□□□ 0.21
MSRB3-206ENST00000535664 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
MSRB3-206ENST00000535664 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
MSRB3-206ENST00000535664 SH3RF1Q7Z6J0 888 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms