RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CBLCQ9ULV8 474 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 SRPK3Q9UPE1 567 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 ATP23Q9Y6H3 246 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 RAPGEF3O95398 923 aa7.57□□□□□ -1.2
PRKDC-205ENST00000535375 ENO2P09104 434 aaPredicted RBP7.57□□□□□ -1.2
PRKDC-205ENST00000535375 HOXA5P20719 270 aa7.57□□□□□ -1.2
PRKDC-205ENST00000535375 ADAM9Q13443 819 aa7.57□□□□□ -1.2
PRKDC-205ENST00000535375 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
PRKDC-205ENST00000535375 SH3RF2Q8TEC5 729 aa7.57□□□□□ -1.2
PRKDC-205ENST00000535375 RIC8BQ9NVN3 520 aa7.57□□□□□ -1.2
PRKDC-205ENST00000535375 TELO2Q9Y4R8 837 aa7.57□□□□□ -1.2
PRKDC-205ENST00000535375 TCRBV5S4A2TA0A5A2 114 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 OTOL1A6NHN0 477 aaPredicted RBP7.56□□□□□ -1.2
PRKDC-205ENST00000535375 DDX3XO00571 662 aaKnown RBP eCLIP7.56□□□□□ -1.2
PRKDC-205ENST00000535375 KCNQ2O43526 872 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 JAM2P57087 298 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 GJA9P57773 515 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 FNDC3BQ53EP0 1204 aaKnown RBP7.56□□□□□ -1.2
PRKDC-205ENST00000535375 NT5DC1Q5TFE4 455 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 LILRA6Q6PI73 481 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 SCLYQ96I15 445 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 PDGFDQ9GZP0 370 aaPredicted RBP7.56□□□□□ -1.2
PRKDC-205ENST00000535375 L2HGDHQ9H9P8 463 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 RBPJLQ9UBG7 517 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 RAPGEFL1Q9UHV5 662 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 COQ6Q9Y2Z9 468 aa7.56□□□□□ -1.2
PRKDC-205ENST00000535375 TCRBV16S1A1N1A0A5B0 115 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 B4E1Z4 1266 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 AMY2AP04746 511 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 PTPN1P18031 435 aaKnown RBP7.55□□□□□ -1.2
PRKDC-205ENST00000535375 AMY2BP19961 511 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 GJA4P35212 333 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 CTSWP56202 376 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 LACTBP83111 547 aaPredicted RBP7.55□□□□□ -1.2
PRKDC-205ENST00000535375 FIGNQ5HY92 759 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 FGD2Q7Z6J4 655 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 FAM124AQ86V42 546 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 CISD2Q8N5K1 135 aaKnown RBP7.55□□□□□ -1.2
PRKDC-205ENST00000535375 ADAMTS17Q8TE56 1095 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 CELF4Q9BZC1 486 aaKnown RBP7.55□□□□□ -1.2
PRKDC-205ENST00000535375 XYLT2Q9H1B5 865 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 DLL4Q9NR61 685 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 TMEM260Q9NX78 707 aa7.55□□□□□ -1.2
PRKDC-205ENST00000535375 ESYT3A0FGR9 886 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 ZNF561-AS1K7EIQ3 104 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 MAN2B1O00754 1011 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 PPP1R12AO14974 1030 aaPredicted RBP7.54□□□□□ -1.2
PRKDC-205ENST00000535375 FBXO21O94952 628 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 NPTXRO95502 500 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 ASMTLO95671 621 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 CYP1A1P04798 512 aaPredicted RBP7.54□□□□□ -1.2
PRKDC-205ENST00000535375 CKMP06732 381 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 CD276Q5ZPR3 534 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 MCTP2Q6DN12 878 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 DDX53Q86TM3 631 aaKnown RBP7.54□□□□□ -1.2
PRKDC-205ENST00000535375 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
PRKDC-205ENST00000535375 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 SYNPOQ8N3V7 929 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 RNPC3Q96LT9 517 aaKnown RBP7.54□□□□□ -1.2
PRKDC-205ENST00000535375 KANSL2Q9H9L4 492 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 TRIM39Q9HCM9 518 aa7.54□□□□□ -1.2
PRKDC-205ENST00000535375 ACOT7O00154 380 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 KCNK3O14649 394 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 OPA1O60313 960 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 IL13P35225 146 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 GLRBP48167 497 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 PFKPQ01813 784 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 KIAA2012Q0VF49 1180 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 FAM26FQ5R3K3 315 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 TRMT10BQ6PF06 316 aaKnown RBP7.53□□□□□ -1.2
PRKDC-205ENST00000535375 FRMD5Q7Z6J6 570 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 IGSF22Q8N9C0 903 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 CLUHP3Q96NS8 147 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 ARHGAP20Q9P2F6 1191 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 ARHGAP28Q9P2N2 729 aa7.53□□□□□ -1.2
PRKDC-205ENST00000535375 PRAMEF25A6NGN4 478 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 FAM90A27PA6NNH2 459 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 IGFALSP35858 605 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 FLT3P36888 993 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 NFIXQ14938 502 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 TCEA2Q15560 299 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 SKIDA1Q1XH10 827 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 PRR31Q5SQ13 230 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 PROSER1Q86XN7 944 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 C2orf69Q8N8R5 385 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 DTX3Q8N9I9 347 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 TXNDC5Q8NBS9 432 aaKnown RBP7.52□□□□□ -1.21
PRKDC-205ENST00000535375 APPBP2Q92624 585 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 TMEM168Q9H0V1 697 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 SMURF1Q9HCE7 757 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 FTSJ1Q9UET6 329 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 WASF3Q9UPY6 502 aa7.52□□□□□ -1.21
PRKDC-205ENST00000535375 SCDO00767 359 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 NOBOXO60393 691 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 CLASP2O75122 1294 aaKnown RBP7.51□□□□□ -1.21
PRKDC-205ENST00000535375 ZNF28P17035 718 aa7.51□□□□□ -1.21
PRKDC-205ENST00000535375 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-205ENST00000535375 DBPQ10586 325 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-205ENST00000535375 PHF19Q5T6S3 580 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms