RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 DOCK5Q9H7D0 1870 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 RIC8AQ9NPQ8 531 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 PRDM6Q9NQX0 595 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 PKD2L1Q9P0L9 805 aa18.53■□□□□ 0.56
CLSTN3-204ENST00000535313 NRCAMQ92823 1304 aa18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 FUT2Q10981 343 aa18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 TCTN1Q2MV58 587 aa18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 TMCO2Q7Z6W1 182 aaPredicted RBP18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 GLG1Q92896 1179 aa18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 JAKMIP1Q96N16 626 aaKnown RBP18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 THEGQ9P2T0 379 aa18.52■□□□□ 0.56
CLSTN3-204ENST00000535313 SMCO2A6NFE2 343 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 STXBP3O00186 592 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 RFXAPO00287 272 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 GJB5O95377 273 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 AMHP03971 560 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 CTSHP09668 335 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 HSPA4P34932 840 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 TYW1BQ6NUM6 668 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 DBF4BQ8NFT6 615 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 LMBR1Q8WVP7 490 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 ATXN2LQ8WWM7 1075 aaKnown RBP18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 SEPT8Q92599 483 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 KCNB2Q92953 911 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 RAD9AQ99638 391 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 MXRA8Q9BRK3 442 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 JPH1Q9HDC5 661 aaPredicted RBP18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 BARHL2Q9NY43 387 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 ERAP1Q9NZ08 941 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 TRANK1O15050 2925 aa18.51■□□□□ 0.55
CLSTN3-204ENST00000535313 GSTTP1A0A1W2PQM5 241 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 ARHGEF15O94989 841 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 REC8O95072 547 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 CPA1P15085 419 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 CDC27P30260 824 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 PPFIA1Q13136 1202 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 PLEKHG4Q58EX7 1191 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 FAM117BQ6P1L5 589 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 Q6ZUG5 572 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 ANO3Q9BYT9 981 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 SMARCAD1Q9H4L7 1026 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 KCNH7Q9NS40 1196 aa18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 FAM217BQ9NTX9 383 aaPredicted RBP18.5■□□□□ 0.55
CLSTN3-204ENST00000535313 LCHNA4D1U4 455 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 EPOPA6NHQ4 379 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 POU3F3P20264 500 aaPredicted RBP18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 MARK3P27448 753 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 ADAM17P78536 824 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 APOBRQ0VD83 1088 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 AP3B2Q13367 1082 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 TAF2Q6P1X5 1199 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 MYOCDQ8IZQ8 938 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 BRF1Q92994 677 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 PGBD1Q96JS3 809 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 SDF4Q9BRK5 362 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 AZI2Q9H6S1 392 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 SNX14Q9Y5W7 946 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 MTCH2Q9Y6C9 303 aa18.49■□□□□ 0.55
CLSTN3-204ENST00000535313 PRRC2BQ5JSZ5 2229 aaKnown RBP18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 PSMA5P28066 241 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 ZNF76P36508 570 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 MRPS5P82675 430 aaKnown RBP18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 SKIV2LQ15477 1246 aaKnown RBP18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 GRIK4Q16099 956 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 PFKFB3Q16875 520 aaPredicted RBP18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 CEP55Q53EZ4 464 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 RSPH3Q86UC2 560 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 CYP2W1Q8TAV3 490 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 SLC9A2Q9UBY0 812 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 INSL6Q9Y581 213 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 KAT6AQ92794 2004 aa18.48■□□□□ 0.55
CLSTN3-204ENST00000535313 PTPRSQ13332 1948 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 SCG2P13521 617 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 SREBF1P36956 1147 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 FAM26DQ5JW98 314 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 IL27Q8NEV9 243 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 APBB2Q92870 758 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 TNPO1Q92973 898 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 ASB2Q96Q27 587 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 TGS1Q96RS0 853 aaKnown RBP18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 TMEM260Q9NX78 707 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 TUBE1Q9UJT0 475 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 NFASCO94856 1347 aa18.47■□□□□ 0.55
CLSTN3-204ENST00000535313 SPTBN5Q9NRC6 3674 aaKnown RBP18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 ARP10275 920 aa18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 RPS6KB1P23443 525 aa18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 CLK2P49760 499 aaKnown RBP18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 AKAP17AQ02040 695 aaKnown RBP18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 GRB10Q13322 594 aa18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 RUFY4Q6ZNE9 571 aa18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 RPAINQ86UA6 219 aa18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 IFIH1Q9BYX4 1025 aaKnown RBP18.46■□□□□ 0.55
CLSTN3-204ENST00000535313 AGO4Q9HCK5 861 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms