RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CWF19L1Q69YN2 538 aaKnown RBP9.75□□□□□ -0.85
CLIP1-206ENST00000535290 SYCE2Q6PIF2 218 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 ITPRIPQ8IWB1 547 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 IFNL3Q8IZI9 196 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 SYTL5Q8TDW5 730 aaPredicted RBP9.75□□□□□ -0.85
CLIP1-206ENST00000535290 RNPEPQ9H4A4 650 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 MRVI1Q9Y6F6 885 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 RALGAPA2Q2PPJ7 1873 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 C2CD4DB7Z1M9 353 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 PATL2C9JE40 543 aaKnown RBP9.74□□□□□ -0.85
CLIP1-206ENST00000535290 M0R2C6 588 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 CHRNA1P02708 482 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 ASGR2P07307 311 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 GHRP10912 638 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
CLIP1-206ENST00000535290 NOVP48745 357 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 PPARAQ07869 468 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 ANGPT1Q15389 498 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 DUSP6Q16828 381 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 USH1GQ495M9 461 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 TPRNQ4KMQ1 711 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 FAM26DQ5JW98 314 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 FLCNQ8NFG4 579 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 MICAL1Q8TDZ2 1067 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 NSUN6Q8TEA1 469 aaKnown RBP9.74□□□□□ -0.85
CLIP1-206ENST00000535290 APPBP2Q92624 585 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 SPATA33Q96N06 139 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 NEK1Q96PY6 1258 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 MFSD1Q9H3U5 465 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 RALYQ9UKM9 306 aaKnown RBP9.74□□□□□ -0.85
CLIP1-206ENST00000535290 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
CLIP1-206ENST00000535290 MYO10Q9HD67 2058 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 CFAP47Q6ZTR5 3102 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 USP24Q9UPU5 2620 aa9.74□□□□□ -0.85
CLIP1-206ENST00000535290 FASNP49327 2511 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 ZNF316A6NFI3 1004 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 TSPY2A6NKD2 308 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 H3BRB1 525 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 EIF3JO75822 258 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 NPR3P17342 541 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 GNAT2P19087 354 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 EIF2AK2P19525 551 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 TECP42680 631 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 KCNC3Q14003 757 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 ST3GAL2Q16842 350 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 PAN2Q504Q3 1202 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 CELF3Q5SZQ8 465 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 ANKRD54Q6NXT1 300 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 CCDC105Q8IYK2 499 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 CMTR2Q8IYT2 770 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 CRIPAKQ8N1N5 446 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 DCLK2Q8N568 766 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 IWS1Q96ST2 819 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 RMDN3Q96TC7 470 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 EHMT1Q9H9B1 1298 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 SETD4Q9NVD3 440 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 ZBTB47Q9UFB7 747 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 PNMA2Q9UL42 364 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 SUPT16HQ9Y5B9 1047 aaKnown RBP9.73□□□□□ -0.85
CLIP1-206ENST00000535290 R4GN57 208 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 WDR19Q8NEZ3 1342 aa9.73□□□□□ -0.85
CLIP1-206ENST00000535290 RNF113AO15541 343 aaKnown RBP9.72□□□□□ -0.85
CLIP1-206ENST00000535290 GGPS1O95749 300 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 SLC3A2P08195 630 aaKnown RBP9.72□□□□□ -0.85
CLIP1-206ENST00000535290 NR3C2P08235 984 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 AOC1P19801 751 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 GATMP50440 423 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 ERVFC1P60507 584 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 SP2Q02086 613 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 LPIN1Q14693 890 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 RSPO4Q2I0M5 234 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-206ENST00000535290 TMEM184AQ6ZMB5 413 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 RTN4RL1Q86UN2 441 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-206ENST00000535290 DTWD2Q8NBA8 298 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 CYP2W1Q8TAV3 490 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 LINC01599Q8WXQ3 324 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 SEMA4AQ9H3S1 761 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 BCAS3Q9H6U6 928 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
CLIP1-206ENST00000535290 RANBP6O60518 1105 aaKnown RBP9.71□□□□□ -0.86
CLIP1-206ENST00000535290 LGALS2P05162 132 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 PDHBP11177 359 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 ADAM17P78536 824 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 CTDSPL2Q05D32 466 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 ZNF543Q08ER8 600 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-206ENST00000535290 ARHGEF16Q5VV41 709 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 LLGL2Q6P1M3 1020 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 FTSJ3Q8IY81 847 aaKnown RBP9.71□□□□□ -0.86
CLIP1-206ENST00000535290 KBTBD3Q8NAB2 608 aa9.71□□□□□ -0.86
CLIP1-206ENST00000535290 SEC62Q99442 399 aaKnown RBP9.71□□□□□ -0.86
CLIP1-206ENST00000535290 CDCA3Q99618 268 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-206ENST00000535290 HINFPQ9BQA5 517 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms