RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 RAD17O75943 681 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 KIF11P52732 1056 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
NEK4-207ENST00000535191 TRAF1Q13077 416 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 DLGAP5Q15398 846 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 TERF2Q15554 542 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 PDXDC1Q6P996 788 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 TRIM59Q8IWR1 403 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 HNRNPLLQ8WVV9 542 aaKnown RBP15.29■□□□□ 0.04
NEK4-207ENST00000535191 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
NEK4-207ENST00000535191 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
NEK4-207ENST00000535191 SRGAP2O75044 1071 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 LCA5LO95447 670 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 ARHGAP27Q6ZUM4 889 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
NEK4-207ENST00000535191 TBC1D5Q92609 795 aa15.29■□□□□ 0.04
NEK4-207ENST00000535191 SECISBP2LQ93073 1101 aaKnown RBP15.29■□□□□ 0.04
NEK4-207ENST00000535191 CETN3O15182 167 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 EDRF1Q3B7T1 1238 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 FAM83BQ5T0W9 1011 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 GPIHBP1Q8IV16 184 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 REEP2Q9BRK0 252 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 NLRC4Q9NPP4 1024 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 HDAC9Q9UKV0 1011 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 VAV3Q9UKW4 847 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 COL2A1P02458 1487 aaPredicted RBP15.28■□□□□ 0.04
NEK4-207ENST00000535191 NOL4O94818 638 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 CFBP00751 764 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 VIL1P09327 827 aaKnown RBP15.28■□□□□ 0.04
NEK4-207ENST00000535191 CASP5P51878 434 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
NEK4-207ENST00000535191 OGFOD1Q8N543 542 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 MMS19Q96T76 1030 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
NEK4-207ENST00000535191 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
NEK4-207ENST00000535191 CEP72Q9P209 647 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 FAM184BQ9ULE4 1060 aa15.28■□□□□ 0.04
NEK4-207ENST00000535191 ANO9A1A5B4 782 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 EML1O00423 815 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 ERLIN1O75477 346 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 MAGEA1P43355 309 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.04
NEK4-207ENST00000535191 BEND6Q5SZJ8 279 aaPredicted RBP15.27■□□□□ 0.04
NEK4-207ENST00000535191 CCDC174Q6PII3 467 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 CHURC1Q8WUH1 139 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 GMLQ99445 158 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 LSM14BQ9BX40 385 aaKnown RBP15.27■□□□□ 0.04
NEK4-207ENST00000535191 NUCKS1Q9H1E3 243 aaKnown RBP15.27■□□□□ 0.04
NEK4-207ENST00000535191 RGL1Q9NZL6 768 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.04
NEK4-207ENST00000535191 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.04
NEK4-207ENST00000535191 TACC1O75410 805 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 TUBBP07437 444 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 KNOP1Q1ED39 458 aaKnown RBP15.27■□□□□ 0.03
NEK4-207ENST00000535191 ASTE1Q2TB18 679 aaPredicted RBP15.27■□□□□ 0.03
NEK4-207ENST00000535191 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 SFR1Q86XK3 245 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 RTKN2Q8IZC4 609 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 LARGE2Q8N3Y3 721 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 TTLL6Q8N841 843 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 TRIM58Q8NG06 486 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 CAPZA3Q96KX2 299 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 BHMT2Q9H2M3 363 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 ZBTB21Q9ULJ3 1066 aa15.27■□□□□ 0.03
NEK4-207ENST00000535191 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.03
NEK4-207ENST00000535191 IGLV3-22A0A075B6J6 115 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 SSU72P8A0A1W2PR75 194 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 GCOM1H8Y6P7 765 aaPredicted RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 NR2F2P24468 414 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 POLR2FP61218 127 aaKnown RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 SFMBT2Q5VUG0 894 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 HGSNATQ68CP4 663 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 SYN2Q92777 582 aaPredicted RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 UBXN6Q9BZV1 441 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 JADE2Q9NQC1 790 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 TRAF3IP3Q9Y228 551 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 ZNF646O15015 1829 aaPredicted RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 EYA4O95677 639 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 VSNL1P62760 191 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 SMC1AQ14683 1233 aaKnown RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
NEK4-207ENST00000535191 OTOP1Q7RTM1 612 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 TEX2Q8IWB9 1127 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 MLXIPQ9HAP2 919 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 VEZTQ9HBM0 779 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 POLD4Q9HCU8 107 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 PRDM4Q9UKN5 801 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 JRKLQ9Y4A0 524 aa15.26■□□□□ 0.03
NEK4-207ENST00000535191 MAP2K7O14733 419 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms