RNA–Protein interactions for RNA: ENST00000535177.1

CYB561A3-205, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-205ENST00000535177 SLFN12Q8IYM2 578 aa16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 OR6J1Q8NGC5 347 aa16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 COPS5Q92905 334 aa16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 SLC5A5Q92911 643 aa16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 FAM20AQ96MK3 541 aa16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 ZNF396Q96N95 335 aaPredicted RBP16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 SDF4Q9BRK5 362 aa16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 FTOQ9C0B1 505 aaKnown RBP eCLIP16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 SYNRGQ9UMZ2 1314 aa16.18■□□□□ 0.18
CYB561A3-205ENST00000535177 LAD1O00515 517 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 MARCH6O60337 910 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 GAS7O60861 476 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 OR52Z1P0C646 297 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 EPHB4P54760 987 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 ARHGAP1Q07960 439 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 FOXD4L6Q3SYB3 417 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 LRCH2Q5VUJ6 765 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 FOXD4L3Q6VB84 417 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 CYFIP1Q7L576 1253 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 KLHDC9Q8NEP7 349 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 HAS1Q92839 578 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 UIMC1Q96RL1 719 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 RIT2Q99578 217 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 TMEM60Q9H2L4 133 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 MLXIPQ9HAP2 919 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 JPH1Q9HDC5 661 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 PRDM5Q9NQX1 630 aaPredicted RBP16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 TBC1D22BQ9NU19 505 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 PRKAG2Q9UGJ0 569 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 TCEAL9Q9UHQ7 104 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 CEP131Q9UPN4 1083 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 Q9Y3F1 56 aa16.17■□□□□ 0.18
CYB561A3-205ENST00000535177 A0A1W2PQ45 241 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 A0A1W2PQY0 241 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 DDX39AO00148 427 aaKnown RBP16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 SORBS3O60504 671 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 BAG4O95429 457 aaKnown RBP16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 PTGDRQ13258 359 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 LAMC2Q13753 1193 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 SF3A1Q15459 793 aaKnown RBP16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 RNF180Q86T96 592 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 GJA10Q969M2 543 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 FAM161BQ96MY7 647 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 MTMR9Q96QG7 549 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 USP28Q96RU2 1077 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 TEKT3Q9BXF9 490 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 AP5M1Q9H0R1 490 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 SPC25Q9HBM1 224 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 POLR3EQ9NVU0 708 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
CYB561A3-205ENST00000535177 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 DHX15O43143 795 aaKnown RBP16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 DYNC1LI2O43237 492 aaPredicted RBP16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 PSMD10O75832 226 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 ACLYP53396 1101 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 GJA9P57773 515 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 SP4Q02446 784 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 CEBPZQ03701 1054 aaKnown RBP16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 DNM1Q05193 864 aaKnown RBP16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 C4orf32Q8N8J7 132 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 PPTC7Q8NI37 304 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 SPATA33Q96N06 139 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 DOCK5Q9H7D0 1870 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 SLC9A2Q9UBY0 812 aa16.15■□□□□ 0.18
CYB561A3-205ENST00000535177 NOP56O00567 594 aaKnown RBP16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 PRPHP41219 470 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 CPT1AP50416 773 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 KRT85P78386 507 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 KRT76Q01546 638 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 FAAP100Q0VG06 881 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 KCNA10Q16322 511 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 HSDL1Q3SXM5 330 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 ZNF746Q6NUN9 644 aaPredicted RBP16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 AFG1LQ8WV93 481 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 TSEN34Q9BSV6 310 aaKnown RBP16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 VAV3Q9UKW4 847 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 ELP1O95163 1332 aa16.14■□□□□ 0.17
CYB561A3-205ENST00000535177 CHMP2AO43633 222 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 YEATS4O95619 227 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 CCNE2O96020 404 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 MMP3P08254 477 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 CLTBP09497 229 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 NCLP19338 710 aaKnown RBP16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 CST5P28325 142 aaPredicted RBP16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 TXKP42681 527 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 NKX3-2P78367 333 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 PTPAQ15257 358 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 FSCN1Q16658 493 aaKnown RBP16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 TMEM266Q2M3C6 531 aa16.13■□□□□ 0.17
CYB561A3-205ENST00000535177 ARL6IP4Q66PJ3 421 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms