RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 BCAS3Q9H6U6 928 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 ABT1Q9ULW3 272 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 DNM3Q9UQ16 869 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MCM3APO60318 1980 aa22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 FAM155AB1AL88 458 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 EIF3JO75822 258 aaKnown RBP22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 KCNA2P16389 499 aa22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SLC12A3P55017 1021 aa22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 GNPTABQ3T906 1256 aa22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 ZNF658Q5TYW1 1059 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 GDAQ9Y2T3 454 aa22.71■■□□□ 1.23
TNFRSF1A-205ENST00000534885 RHOBTB3O94955 611 aa22.7■■□□□ 1.23
TNFRSF1A-205ENST00000534885 CCNE2O96020 404 aa22.7■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PDE4DQ08499 809 aa22.7■■□□□ 1.23
TNFRSF1A-205ENST00000534885 BANK1Q8NDB2 785 aa22.7■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PIGOQ8TEQ8 1089 aa22.7■■□□□ 1.23
TNFRSF1A-205ENST00000534885 DACH1Q9UI36 760 aa22.7■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SPATA31C2B4DYI2 1134 aa22.7■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CDHR1Q96JP9 859 aa22.7■■□□□ 1.22
TNFRSF1A-205ENST00000534885 MED15Q96RN5 788 aa22.7■■□□□ 1.22
TNFRSF1A-205ENST00000534885 LXNQ9BS40 222 aa22.7■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SAMM50Q9Y512 469 aa22.7■■□□□ 1.22
TNFRSF1A-205ENST00000534885 PPP1R3GB7ZBB8 358 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ZBTB39O15060 712 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 FAM110CQ1W6H9 321 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 KLHL10Q6JEL2 608 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SEPT14Q6ZU15 432 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 GPBP1Q86WP2 473 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 DNAJC19Q96DA6 116 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 IKBKBO14920 756 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CYP11B2P19099 503 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 MYL5Q02045 173 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SP2Q02086 613 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CNNM4Q6P4Q7 775 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 TRMT44Q8IYL2 757 aaKnown RBP22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 LRRC27Q9C0I9 530 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 BHMT2Q9H2M3 363 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 EXOC1Q9NV70 894 aa22.69■■□□□ 1.22
TNFRSF1A-205ENST00000534885 PLXNA1Q9UIW2 1896 aa22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 TMEM88BA6NKF7 163 aa22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 KRT76Q01546 638 aa22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ARSHQ5FYA8 562 aa22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 EEPD1Q7L9B9 569 aa22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SYT2Q8N9I0 419 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CPA4Q9UI42 421 aa22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
TNFRSF1A-205ENST00000534885 NPHP3-ACAD11A0A0J9YXS1 232 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SORBS3O60504 671 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 TOMM70O94826 608 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 IDEP14735 1019 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ADORA2AP29274 412 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ICAM3P32942 547 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 TAF1CQ15572 869 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 UNC13DQ70J99 1090 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 IFNL1Q8IU54 200 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 HPS3Q969F9 1004 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 HSD3B7Q9H2F3 369 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 TELO2Q9Y4R8 837 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 WDR81Q562E7 1941 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ADGRA2Q96PE1 1338 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SMTNL1A8MU46 457 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ADCY5O95622 1261 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 EYA4O95677 639 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 MUTP22033 750 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 PRCPP42785 496 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 RAD51AP2Q09MP3 1159 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 GIMAP8Q8ND71 665 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 NEK9Q8TD19 979 aa22.67■■□□□ 1.22
TNFRSF1A-205ENST00000534885 NFASCO94856 1347 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 WDR64B1ANS9 1081 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 P4HBP07237 508 aaKnown RBP22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ERCC5P28715 1186 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 JAK3P52333 1124 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CACNB1Q02641 598 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 GPR142Q7Z601 462 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 KCTD17Q8N5Z5 321 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CCDC102AQ96A19 550 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ZIC5Q96T25 663 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 TCEAL9Q9UHQ7 104 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 PVALEFA0A1B0GWK0 134 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 COBLO75128 1261 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SP4Q02446 784 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CCDC173Q0VFZ6 552 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 STK4Q13043 487 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 GRM1Q13255 1194 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ZNF746Q6NUN9 644 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CCDC47Q96A33 483 aaKnown RBP22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 PDLIM2Q96JY6 352 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 JPH1Q9HDC5 661 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ZCCHC17Q9NP64 241 aaKnown RBP22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 IVNS1ABPQ9Y6Y0 642 aa22.66■■□□□ 1.22
TNFRSF1A-205ENST00000534885 SFNP31947 248 aa22.65■■□□□ 1.22
TNFRSF1A-205ENST00000534885 STX17P56962 302 aa22.65■■□□□ 1.22
TNFRSF1A-205ENST00000534885 UGCGQ16739 394 aa22.65■■□□□ 1.22
TNFRSF1A-205ENST00000534885 NACC1Q96RE7 527 aa22.65■■□□□ 1.22
TNFRSF1A-205ENST00000534885 BMP2KQ9NSY1 1161 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF1A-205ENST00000534885 CTNND2Q9UQB3 1225 aa22.65■■□□□ 1.22
TNFRSF1A-205ENST00000534885 B4DLN1 442 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 INHBEP58166 350 aa22.64■■□□□ 1.22
TNFRSF1A-205ENST00000534885 ZNF792Q3KQV3 632 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms