RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ABCB5Q2M3G0 1257 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 NBPF12Q5TAG4 269 aaPredicted RBP9.96□□□□□ -0.82
SF3B2-216ENST00000534765 PDXDC2PQ6P474 469 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 MKL1Q969V6 931 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 FHDC1Q9C0D6 1143 aaPredicted RBP9.96□□□□□ -0.82
SF3B2-216ENST00000534765 INTS13Q9NVM9 706 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 MCM8Q9UJA3 840 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 GJA3Q9Y6H8 435 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.82
SF3B2-216ENST00000534765 hCG_2014768A0A024R1R8 64 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 FZD9O00144 591 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 MEIS2O14770 477 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 SARSP49591 514 aaKnown RBP9.96□□□□□ -0.82
SF3B2-216ENST00000534765 RASA3Q14644 834 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 LRRC23Q53EV4 343 aaPredicted RBP9.96□□□□□ -0.82
SF3B2-216ENST00000534765 HHATQ5VTY9 493 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 TOGARAM2Q6ZUX3 1019 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 ARMC9Q7Z3E5 817 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 AMOTL1Q8IY63 956 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 NIM1KQ8IY84 436 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 ZNF483Q8TF39 744 aaPredicted RBP9.96□□□□□ -0.82
SF3B2-216ENST00000534765 HPS3Q969F9 1004 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.96□□□□□ -0.82
SF3B2-216ENST00000534765 HAUS2Q9NVX0 235 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 MAN1B1Q9UKM7 699 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 GUCA1BQ9UMX6 200 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 ARHGAP6O43182 974 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 NEFHP12036 1026 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 CUL4BQ13620 913 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 LETM2Q2VYF4 491 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 USH1GQ495M9 461 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 CC2D2BQ6DHV5 1058 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 KCNK18Q7Z418 384 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 MAATS1Q7Z4T9 603 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 PURBQ96QR8 312 aaKnown RBP9.95□□□□□ -0.82
SF3B2-216ENST00000534765 SWAP70Q9UH65 585 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 CPP00450 1065 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 EPS15P42566 896 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 LAMB3Q13751 1172 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 HIBCHQ6NVY1 386 aaPredicted RBP9.95□□□□□ -0.82
SF3B2-216ENST00000534765 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 SH3RF1Q7Z6J0 888 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 PPP1R12CQ9BZL4 782 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 R3HDMLQ9H3Y0 253 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 TMEM232C9JQI7 657 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 HOXA13P31271 388 aaPredicted RBP9.95□□□□□ -0.82
SF3B2-216ENST00000534765 MXRA7P84157 204 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 CCDC96Q2M329 555 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 SLFN13Q68D06 897 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 MYLK4Q86YV6 388 aaPredicted RBP9.95□□□□□ -0.82
SF3B2-216ENST00000534765 HAS1Q92839 578 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 PAGE5Q96GU1 130 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 TSC22D3Q99576 134 aa9.95□□□□□ -0.82
SF3B2-216ENST00000534765 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
SF3B2-216ENST00000534765 SAFBQ15424 915 aaKnown RBP eCLIP9.94□□□□□ -0.82
SF3B2-216ENST00000534765 FAM83BQ5T0W9 1011 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 PARP9Q8IXQ6 854 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 DAGLBQ8NCG7 672 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 B4GALNT2Q8NHY0 566 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 SPATA20Q8TB22 786 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 LMBR1Q8WVP7 490 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 FAM151AQ8WW52 585 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 SLC40A1Q9NP59 571 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 HACL1Q9UJ83 578 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 OTOFQ9HC10 1997 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 GOLGA6L10A6NI86 522 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 ENC1O14682 589 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 HSF2BPO75031 334 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 ENTPD3O75355 529 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 PPFIA1Q13136 1202 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 CIAPIN1Q6FI81 312 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 SLC35F6Q8N357 371 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 GLIS3Q8NEA6 775 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 ACRBPQ8NEB7 543 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 DHX36Q9H2U1 1008 aaKnown RBP9.94□□□□□ -0.82
SF3B2-216ENST00000534765 ZBTB21Q9ULJ3 1066 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 POTEMA6NI47 508 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 MTF1Q14872 753 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 SLC30A9Q6PML9 568 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 SARM1Q6SZW1 724 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 SH2D3CQ8N5H7 860 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 EEF2KMTQ96G04 330 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 CHCHD3Q9NX63 227 aaKnown RBP9.94□□□□□ -0.82
SF3B2-216ENST00000534765 CDC23Q9UJX2 597 aa9.94□□□□□ -0.82
SF3B2-216ENST00000534765 MYO3BQ8WXR4 1341 aa9.93□□□□□ -0.82
SF3B2-216ENST00000534765 ZNF280AP59817 542 aaPredicted RBP9.93□□□□□ -0.82
SF3B2-216ENST00000534765 CDC37Q16543 378 aaPredicted RBP9.93□□□□□ -0.82
SF3B2-216ENST00000534765 PREPLQ4J6C6 727 aaPredicted RBP9.93□□□□□ -0.82
SF3B2-216ENST00000534765 SUPT20HQ8NEM7 779 aa9.93□□□□□ -0.82
SF3B2-216ENST00000534765 NSMCE1Q8WV22 266 aa9.93□□□□□ -0.82
SF3B2-216ENST00000534765 RRP36Q96EU6 259 aaKnown RBP9.93□□□□□ -0.82
SF3B2-216ENST00000534765 CNOT7Q9UIV1 285 aaKnown RBP9.93□□□□□ -0.82
SF3B2-216ENST00000534765 L1RE1Q9UN81 338 aa9.93□□□□□ -0.82
SF3B2-216ENST00000534765 WDR90Q96KV7 1748 aa9.93□□□□□ -0.82
SF3B2-216ENST00000534765 MEFVO15553 781 aaPredicted RBP9.93□□□□□ -0.82
SF3B2-216ENST00000534765 TECP42680 631 aa9.93□□□□□ -0.82
SF3B2-216ENST00000534765 SLC1A4P43007 532 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms