RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CYP3A7-CYP3A51PA0A087WV96 503 aa15.89■□□□□ 0.13
VPS11-205ENST00000534551 CABYRO75952 493 aa15.89■□□□□ 0.13
VPS11-205ENST00000534551 CYP3A7P24462 503 aa15.89■□□□□ 0.13
VPS11-205ENST00000534551 CDK7P50613 346 aa15.89■□□□□ 0.13
VPS11-205ENST00000534551 KIAA0753Q2KHM9 967 aa15.89■□□□□ 0.13
VPS11-205ENST00000534551 Q4G0T1 1027 aa15.89■□□□□ 0.13
VPS11-205ENST00000534551 SLC43A3Q8NBI5 491 aa15.89■□□□□ 0.13
VPS11-205ENST00000534551 GIMAP8Q8ND71 665 aaPredicted RBP15.89■□□□□ 0.13
VPS11-205ENST00000534551 LOXHD1Q8IVV2 1947 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 HAS3O00219 553 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 MAFGO15525 162 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 KPNA6O60684 536 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 CLTBP09497 229 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 ITGB8P26012 769 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 C1orf53Q5VUE5 145 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 LRCH2Q5VUJ6 765 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 MCTP1Q6DN14 999 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 GDF6Q6KF10 455 aaPredicted RBP15.88■□□□□ 0.13
VPS11-205ENST00000534551 MOXD1Q6UVY6 613 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 ANKRD33Q7Z3H0 272 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 NOSTRINQ8IVI9 506 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 CCDC60Q8IWA6 550 aaPredicted RBP15.88■□□□□ 0.13
VPS11-205ENST00000534551 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 SLC5A5Q92911 643 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 FOXP1Q9H334 677 aaPredicted RBP15.88■□□□□ 0.13
VPS11-205ENST00000534551 UNC45AQ9H3U1 944 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 EVPLQ92817 2033 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 UMODL1Q5DID0 1318 aa15.88■□□□□ 0.13
VPS11-205ENST00000534551 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
VPS11-205ENST00000534551 TRIM43BA6NCK2 446 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 H3BQV1 296 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 GAS7O60861 476 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 CYP2C9P11712 490 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 ZNF200P98182 395 aaPredicted RBP15.87■□□□□ 0.13
VPS11-205ENST00000534551 GNL2Q13823 731 aaKnown RBP15.87■□□□□ 0.13
VPS11-205ENST00000534551 SEPT1Q8WYJ6 367 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 TRIM43Q96BQ3 446 aaPredicted RBP15.87■□□□□ 0.13
VPS11-205ENST00000534551 CTAGE1Q96RT6 745 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 TMEM60Q9H2L4 133 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 KCNMB3Q9NPA1 279 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 HDAC6Q9UBN7 1215 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 EMSYQ7Z589 1322 aa15.87■□□□□ 0.13
VPS11-205ENST00000534551 RANBP2P49792 3224 aaKnown RBP15.86■□□□□ 0.13
VPS11-205ENST00000534551 H3BRB1 525 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 PPFIA4O75335 1185 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 PSMD10O75832 226 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 CD4P01730 458 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 SUPT20HL2P0C7V6 817 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 SMIM10L2AP0DMW4 78 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 SMIM10L2BP0DMW5 78 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 GCFC2P16383 781 aaKnown RBP15.86■□□□□ 0.13
VPS11-205ENST00000534551 MCM7P33993 719 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 TOB1P50616 345 aaPredicted RBP15.86■□□□□ 0.13
VPS11-205ENST00000534551 UGCGQ16739 394 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 LARP1BQ659C4 914 aaKnown RBP15.86■□□□□ 0.13
VPS11-205ENST00000534551 PPP4R3AQ6IN85 833 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 FERMT3Q86UX7 667 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 HAS1Q92839 578 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 WNT8BQ93098 351 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 ZBTB10Q96DT7 871 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 TEKT3Q9BXF9 490 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 PPP1R12CQ9BZL4 782 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 RNPEPQ9H4A4 650 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 TUT1Q9H6E5 874 aaKnown RBP15.86■□□□□ 0.13
VPS11-205ENST00000534551 VAV3Q9UKW4 847 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 TBX21Q9UL17 535 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 MROH7Q68CQ1 1323 aa15.86■□□□□ 0.13
VPS11-205ENST00000534551 NEMFO60524 1076 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 LGR5O75473 907 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 U2AF2P26368 475 aaKnown RBP eCLIP15.85■□□□□ 0.13
VPS11-205ENST00000534551 MDM2Q00987 491 aaPredicted RBP15.85■□□□□ 0.13
VPS11-205ENST00000534551 ZNF174Q15697 407 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 TTC38Q5R3I4 469 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 NFRKBQ6P4R8 1299 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 ABHD15Q6UXT9 468 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 GLG1Q92896 1179 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 INTS4Q96HW7 963 aaKnown RBP15.85■□□□□ 0.13
VPS11-205ENST00000534551 KATNAL1Q9BW62 490 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 GTF2IRD1Q9UHL9 959 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 TET1Q8NFU7 2136 aa15.85■□□□□ 0.13
VPS11-205ENST00000534551 DCDC2CA8MYV0 355 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 EML1O00423 815 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 BACH1O14867 736 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 ATG7O95352 703 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 SYT1P21579 422 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 KRT76Q01546 638 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 ZNF746Q6NUN9 644 aaPredicted RBP15.84■□□□□ 0.13
VPS11-205ENST00000534551 B3GNT9Q6UX72 402 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 TRMT1LQ7Z2T5 733 aaKnown RBP15.84■□□□□ 0.13
VPS11-205ENST00000534551 SESTD1Q86VW0 696 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 C7orf31Q8N865 590 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 TRAPPC12Q8WVT3 735 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 DHX38Q92620 1227 aaKnown RBP15.84■□□□□ 0.13
VPS11-205ENST00000534551 TBC1D22BQ9NU19 505 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 TMEM39AQ9NV64 488 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 ZNF215Q9UL58 517 aaPredicted RBP15.84■□□□□ 0.13
VPS11-205ENST00000534551 SAMM50Q9Y512 469 aa15.84■□□□□ 0.13
VPS11-205ENST00000534551 PCDHB6Q9Y5E3 794 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms