RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 IL25Q9H293 177 aa17.28■□□□□ 0.36
CTSB-230ENST00000534149 OSBPL3Q9H4L5 887 aa17.28■□□□□ 0.36
CTSB-230ENST00000534149 RIOX1Q9H6W3 641 aa17.28■□□□□ 0.36
CTSB-230ENST00000534149 ZNF215Q9UL58 517 aaPredicted RBP17.28■□□□□ 0.36
CTSB-230ENST00000534149 ADGRA3Q8IWK6 1321 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 SPATA31C2B4DYI2 1134 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 C5orf67F2Z3F1 127 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 GRM6O15303 877 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 CYTH3O43739 400 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 CHRNA1P02708 482 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 LINC00271P0C7V0 271 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 GHRP10912 638 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 IRS1P35568 1242 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 NHLH1Q02575 133 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 DLX2Q07687 328 aaPredicted RBP17.27■□□□□ 0.36
CTSB-230ENST00000534149 HYAL1Q12794 435 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 TRAF1Q13077 416 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 CHD1LQ86WJ1 897 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 C11orf84Q9BUA3 381 aaPredicted RBP17.27■□□□□ 0.36
CTSB-230ENST00000534149 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
CTSB-230ENST00000534149 PNMA6FA0A0J9YX94 578 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 FIBPO43427 364 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 NCK2O43639 380 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 STAM2O75886 525 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 RB1P06400 928 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 BMPR1AP36894 532 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 RUFY4Q6ZNE9 571 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 HFE2Q6ZVN8 426 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
CTSB-230ENST00000534149 RC3H2Q9HBD1 1191 aaKnown RBP17.26■□□□□ 0.35
CTSB-230ENST00000534149 TTC3P53804 2025 aa17.25■□□□□ 0.35
CTSB-230ENST00000534149 MBTPS2O43462 519 aa17.25■□□□□ 0.35
CTSB-230ENST00000534149 GTF2F1P35269 517 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTSB-230ENST00000534149 SMAD2Q15796 467 aaKnown RBP17.25■□□□□ 0.35
CTSB-230ENST00000534149 UPF3BQ9BZI7 483 aaKnown RBP17.25■□□□□ 0.35
CTSB-230ENST00000534149 LMAN2LQ9H0V9 348 aa17.25■□□□□ 0.35
CTSB-230ENST00000534149 IGFLR1Q9H665 355 aa17.25■□□□□ 0.35
CTSB-230ENST00000534149 MUTYHQ9UIF7 546 aa17.25■□□□□ 0.35
CTSB-230ENST00000534149 RWDD3Q9Y3V2 267 aa17.25■□□□□ 0.35
CTSB-230ENST00000534149 NRCAMQ92823 1304 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 TECTAO75443 2155 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 IFIT3O14879 490 aaKnown RBP17.24■□□□□ 0.35
CTSB-230ENST00000534149 TBX10O75333 385 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 NUCB1Q02818 461 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 MGAT3Q09327 533 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 TRDNQ13061 729 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 LPIN1Q14693 890 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 CLP1Q92989 425 aaKnown RBP17.24■□□□□ 0.35
CTSB-230ENST00000534149 KCNH6Q9H252 994 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 EHMT1Q9H9B1 1298 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 KIAA1671Q9BY89 1806 aa17.24■□□□□ 0.35
CTSB-230ENST00000534149 ENPP3O14638 875 aa17.23■□□□□ 0.35
CTSB-230ENST00000534149 LINC01565O15544 149 aa17.23■□□□□ 0.35
CTSB-230ENST00000534149 SMAD4Q13485 552 aaKnown RBP17.23■□□□□ 0.35
CTSB-230ENST00000534149 BTG3Q14201 252 aaPredicted RBP17.23■□□□□ 0.35
CTSB-230ENST00000534149 POP1Q99575 1024 aaKnown RBP17.23■□□□□ 0.35
CTSB-230ENST00000534149 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
CTSB-230ENST00000534149 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
CTSB-230ENST00000534149 ERICH2A1L162 156 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 IGHDP01880 384 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 MMP1P03956 469 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 MARK3P27448 753 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 TCF7P36402 384 aaPredicted RBP17.22■□□□□ 0.35
CTSB-230ENST00000534149 TROAPQ12815 778 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 PPFIA1Q13136 1202 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 WTAPQ15007 396 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 PCNX4Q63HM2 1172 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 TAF2Q6P1X5 1199 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 RNF135Q8IUD6 432 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 ZNF689Q96CS4 500 aaPredicted RBP17.22■□□□□ 0.35
CTSB-230ENST00000534149 SENP7Q9BQF6 1050 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 CD207Q9UJ71 328 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 TUBE1Q9UJT0 475 aa17.22■□□□□ 0.35
CTSB-230ENST00000534149 CAMK1Q14012 370 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 GRIK4Q16099 956 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 HERC4Q5GLZ8 1057 aaPredicted RBP17.21■□□□□ 0.35
CTSB-230ENST00000534149 FBXO47Q5MNV8 452 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 RSPH3Q86UC2 560 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 DNAJB3Q8WWF6 145 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 CDY2AQ9Y6F7 541 aa17.21■□□□□ 0.35
CTSB-230ENST00000534149 LOXHD1Q8IVV2 1947 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 STXBP3O00186 592 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 ATP9AO75110 1047 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 DGKIO75912 1065 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 CYP21A2P08686 494 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 NDUFV1P49821 464 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 TSHZ1Q6ZSZ6 1077 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 CUL5Q93034 780 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 ZBTB10Q96DT7 871 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 MFSD14AQ96MC6 490 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 PLVAPQ9BX97 442 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 PLAGL2Q9UPG8 496 aa17.2■□□□□ 0.34
CTSB-230ENST00000534149 MRPL42Q9Y6G3 142 aaKnown RBP17.2■□□□□ 0.34
CTSB-230ENST00000534149 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms