RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 RTP5Q14D33 572 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.87□□□□□ -1.47
ITGB1-219ENST00000534049 DHRS4Q9BTZ2 278 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 DLL4Q9NR61 685 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 PPARGC1AQ9UBK2 798 aaKnown RBP5.87□□□□□ -1.47
ITGB1-219ENST00000534049 FTSJ1Q9UET6 329 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 PFDN2Q9UHV9 154 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 URB2Q14146 1524 aaKnown RBP5.87□□□□□ -1.47
ITGB1-219ENST00000534049 ADAMTS20P59510 1910 aa5.87□□□□□ -1.47
ITGB1-219ENST00000534049 KDM2BQ8NHM5 1336 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 DDX3XO00571 662 aaKnown RBP eCLIP5.86□□□□□ -1.473e-13■■■■□ 23.1
ITGB1-219ENST00000534049 SLC27A2O14975 620 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 CYP1A1P04798 512 aaPredicted RBP5.86□□□□□ -1.47
ITGB1-219ENST00000534049 FAHP16930 419 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 CNR2P34972 360 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 GJA4P35212 333 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 TUSC3Q13454 348 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 RASA3Q14644 834 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 SPATS1Q496A3 300 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 PAN2Q504Q3 1202 aaKnown RBP5.86□□□□□ -1.47
ITGB1-219ENST00000534049 FAM47CQ5HY64 1035 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 KCTD1Q719H9 257 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 TXNDC5Q8NBS9 432 aaKnown RBP5.86□□□□□ -1.47
ITGB1-219ENST00000534049 KCNJ15Q99712 375 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 BDH2Q9BUT1 245 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 TMEM168Q9H0V1 697 aa5.86□□□□□ -1.47
ITGB1-219ENST00000534049 BLACEA4D250 179 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 K7ESM1 405 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 ENO2P09104 434 aaPredicted RBP5.85□□□□□ -1.47
ITGB1-219ENST00000534049 IL13P35225 146 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 GLIPR1L2Q4G1C9 344 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 MCTP2Q6DN12 878 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 EP400NLQ6ZTU2 488 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 DTX3Q8N9I9 347 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 FBXW5Q969U6 566 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 YTHDC1Q96MU7 727 aaKnown RBP5.85□□□□□ -1.47
ITGB1-219ENST00000534049 SRPK1Q96SB4 655 aaKnown RBP5.85□□□□□ -1.47
ITGB1-219ENST00000534049 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 IPPKQ9H8X2 491 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 BARX1Q9HBU1 254 aaPredicted RBP5.85□□□□□ -1.47
ITGB1-219ENST00000534049 SNTG2Q9NY99 539 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 MRPS23Q9Y3D9 190 aaKnown RBP5.85□□□□□ -1.47
ITGB1-219ENST00000534049 PRDM2Q13029 1718 aa5.85□□□□□ -1.47
ITGB1-219ENST00000534049 ARVCFO00192 962 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 PRICKLE3O43900 615 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-219ENST00000534049 DIAPH1O60610 1272 aaKnown RBP5.84□□□□□ -1.47
ITGB1-219ENST00000534049 FBXO21O94952 628 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 PLATP00750 562 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 BUD31P41223 144 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-219ENST00000534049 ST5P78524 1137 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 GUCY1A3Q02108 690 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 GPR19Q15760 415 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 SKOR2Q2VWA4 1001 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-219ENST00000534049 FAM209AQ5JX71 171 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 PRRT2Q7Z6L0 340 aaPredicted RBP5.84□□□□□ -1.47
ITGB1-219ENST00000534049 STK32CQ86UX6 486 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 ZSWIM2Q8NEG5 633 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 SREK1Q8WXA9 508 aaKnown RBP5.84□□□□□ -1.47
ITGB1-219ENST00000534049 CLEC4DQ8WXI8 215 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 DDX1Q92499 740 aaKnown RBP5.84□□□□□ -1.47
ITGB1-219ENST00000534049 CROTQ9UKG9 612 aa5.84□□□□□ -1.47
ITGB1-219ENST00000534049 ASXL2Q76L83 1435 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 NKRFO15226 690 aaKnown RBP eCLIP5.83□□□□□ -1.48
ITGB1-219ENST00000534049 C6orf222P0C671 652 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-219ENST00000534049 FAM153BP0C7A2 387 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 COL6A2P12110 1019 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 EFEMP1Q12805 493 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 SMAD2Q15796 467 aaKnown RBP5.83□□□□□ -1.48
ITGB1-219ENST00000534049 NFE2L2Q16236 605 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 CRY1Q16526 586 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 ZNF827Q17R98 1081 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 FIGNQ5HY92 759 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 TMC5Q6UXY8 1006 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 FERMT3Q86UX7 667 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 KLHL36Q8N4N3 616 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 THAP3Q8WTV1 239 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-219ENST00000534049 ZSWIM3Q96MP5 696 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 SYT3Q9BQG1 590 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 SRPK3Q9UPE1 567 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 TRAF6Q9Y4K3 522 aa5.83□□□□□ -1.48
ITGB1-219ENST00000534049 ITGB3P05106 788 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 ADRB1P08588 477 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 GRIN1Q05586 938 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 CD276Q5ZPR3 534 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 PKN3Q6P5Z2 889 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 TRMT10BQ6PF06 316 aaKnown RBP5.82□□□□□ -1.48
ITGB1-219ENST00000534049 DBX2Q6ZNG2 339 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 PROSER1Q86XN7 944 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 TTC9BQ8N6N2 239 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 JMYQ8N9B5 988 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 IGDCC4Q8TDY8 1250 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 KISS1RQ969F8 398 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-219ENST00000534049 EXOC2Q96KP1 924 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 CATSPERZQ9NTU4 200 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 ARHGAP20Q9P2F6 1191 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 DUSP10Q9Y6W6 482 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 CCDC88BA6NC98 1476 aa5.82□□□□□ -1.48
ITGB1-219ENST00000534049 ZNF839A8K0R7 811 aa5.81□□□□□ -1.48
ITGB1-219ENST00000534049 LAMTOR5O43504 91 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms