RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ADGRF4Q8IZF3 695 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 LEMD3Q9Y2U8 911 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 USP17L10C9JJH3 530 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 C6orf229H3BNL8 230 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 TADA2BQ86TJ2 420 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 KAT2BQ92831 832 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 MTMR4Q9NYA4 1195 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 ZBTB12Q9Y330 459 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-226ENST00000533820 MEIS1O00470 390 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 EBAG9O00559 213 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 PPP1R12AO14974 1030 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-226ENST00000533820 OPA1O60313 960 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 LCA5LO95447 670 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 NNTQ13423 1086 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 GPBP1Q86WP2 473 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 RPGRQ92834 1020 aaKnown RBP21.25■□□□□ 0.99
CAPN1-226ENST00000533820 FAM107BQ9H098 131 aa21.25■□□□□ 0.99
CAPN1-226ENST00000533820 COL16A1Q07092 1604 aaPredicted RBP21.24■□□□□ 0.99
CAPN1-226ENST00000533820 GPR75-ASB3A0A0A6YYF3 556 aa21.24■□□□□ 0.99
CAPN1-226ENST00000533820 CFAP58Q5T655 872 aa21.24■□□□□ 0.99
CAPN1-226ENST00000533820 FBXW10Q5XX13 1052 aa21.24■□□□□ 0.99
CAPN1-226ENST00000533820 JMJD4Q9H9V9 463 aa21.24■□□□□ 0.99
CAPN1-226ENST00000533820 BMP2KQ9NSY1 1161 aaPredicted RBP21.24■□□□□ 0.99
CAPN1-226ENST00000533820 STRCQ7RTU9 1775 aa21.24■□□□□ 0.99
CAPN1-226ENST00000533820 PRLRP16471 622 aa21.24■□□□□ 0.99
CAPN1-226ENST00000533820 HLTFQ14527 1009 aaKnown RBP eCLIP21.24■□□□□ 0.99
CAPN1-226ENST00000533820 MXD3Q9BW11 206 aa21.24■□□□□ 0.99
CAPN1-226ENST00000533820 SNAP25P60880 206 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 GTF2IP78347 998 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 ADAM9Q13443 819 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 HOMEZQ8IX15 550 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 CEP72Q9P209 647 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 SERPING1P05155 500 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 GUCY1A3Q02108 690 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 EMBQ6PCB8 327 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 IFT20Q8IY31 132 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 PRPF38AQ8NAV1 312 aaKnown RBP21.23■□□□□ 0.99
CAPN1-226ENST00000533820 BCAS3Q9H6U6 928 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 RIC8AQ9NPQ8 531 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 ATP6V0A2Q9Y487 856 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 FAM169AQ9Y6X4 670 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 GRIN2DO15399 1336 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 FAM196BA6NMK8 535 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 GOLGA8KD6RF30 607 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 KCNK3O14649 394 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 NEBLO76041 1014 aa21.23■□□□□ 0.99
CAPN1-226ENST00000533820 NAIF1Q69YI7 327 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-226ENST00000533820 JPH2Q9BR39 696 aaPredicted RBP21.23■□□□□ 0.99
CAPN1-226ENST00000533820 CNTNAP4Q9C0A0 1308 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 SHTN1A0MZ66 631 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 POTEFA5A3E0 1075 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 EIF3HO15372 352 aaKnown RBP eCLIP21.22■□□□□ 0.99
CAPN1-226ENST00000533820 PJA2O43164 708 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 SHOX2O60902 331 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-226ENST00000533820 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 POTEGQ6S5H5 508 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 POTEEQ6S8J3 1075 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 MAATS1Q7Z4T9 603 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 CASKIN2Q8WXE0 1202 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 NDUFAB1O14561 156 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 PLA2G4BP0C869 781 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 TAL1P17542 331 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-226ENST00000533820 SLC9A1P19634 815 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 CASP5P51878 434 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 PDIA5Q14554 519 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 TMEM119Q4V9L6 283 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 COBLL1Q53SF7 1204 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 TCERG1LQ5VWI1 586 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 DDX42Q86XP3 938 aaKnown RBP eCLIP21.22■□□□□ 0.99
CAPN1-226ENST00000533820 IQCDQ96DY2 449 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 AP1M1Q9BXS5 423 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 PSTPIP2Q9H939 334 aa21.22■□□□□ 0.99
CAPN1-226ENST00000533820 SSU72P8A0A1W2PR75 194 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 HPDP32754 393 aaPredicted RBP21.21■□□□□ 0.99
CAPN1-226ENST00000533820 SCNN1DP51172 638 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 SHROOM1Q2M3G4 852 aaPredicted RBP21.21■□□□□ 0.99
CAPN1-226ENST00000533820 ZCWPW2Q504Y3 356 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 DCAF17Q5H9S7 520 aaPredicted RBP21.21■□□□□ 0.99
CAPN1-226ENST00000533820 EMILIN3Q9NT22 766 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 RREB1Q92766 1687 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 ESYT2A0FGR8 921 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 ZNF233A6NK53 670 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 EFCAB13Q8IY85 973 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 SCFD1Q8WVM8 642 aa21.21■□□□□ 0.99
CAPN1-226ENST00000533820 RAD51CO43502 376 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 HNRNPH1P31943 449 aaKnown RBP21.2■□□□□ 0.99
CAPN1-226ENST00000533820 KCNH2Q12809 1159 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 NAB2Q15742 525 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 ASIC2Q16515 512 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 OR2W6PQ8NHA6 318 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 SPAG5Q96R06 1193 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 SH3GL2Q99962 352 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 GGA1Q9UJY5 639 aa21.2■□□□□ 0.99
CAPN1-226ENST00000533820 ITIH3Q06033 890 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 PABPC4Q13310 644 aaKnown RBP eCLIP21.2■□□□□ 0.987e-7■■□□□ 12
CAPN1-226ENST00000533820 SLC18A3Q16572 532 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 ZNF572Q7Z3I7 529 aaPredicted RBP21.2■□□□□ 0.98
CAPN1-226ENST00000533820 GIMAP7Q8NHV1 300 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 DDX4Q9NQI0 724 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms