RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 BARX2Q9UMQ3 279 aaPredicted RBP14.38□□□□□ -0.11
SVIP-205ENST00000533774 TELO2Q9Y4R8 837 aa14.38□□□□□ -0.11
SVIP-205ENST00000533774 H3BRB1 525 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 CHRNA1P02708 482 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 LGALS2P05162 132 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 ITGB1P05556 798 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 MYCLP12524 364 aaPredicted RBP14.37□□□□□ -0.11
SVIP-205ENST00000533774 UBA1P22314 1058 aaKnown RBP14.37□□□□□ -0.11
SVIP-205ENST00000533774 ADAM17P78536 824 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 ALX1Q15699 326 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 QRICH1Q2TAL8 776 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 FAM26DQ5JW98 314 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 ADGRF4Q8IZF3 695 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 EFHBQ8N7U6 833 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 SPPL3Q8TCT6 385 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 GPATCH3Q96I76 525 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 RPGRIP1Q96KN7 1286 aa14.37□□□□□ -0.11
SVIP-205ENST00000533774 TUT1Q9H6E5 874 aaKnown RBP14.37□□□□□ -0.11
SVIP-205ENST00000533774 PRR23AA6NEV1 266 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 ENPP3O14638 875 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 FGAP02671 866 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 NRIP1P48552 1158 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 VN1R2Q8NFZ6 395 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 LINC01599Q8WXQ3 324 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 APBB2Q92870 758 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 PHF7Q9BWX1 381 aaPredicted RBP14.36□□□□□ -0.11
SVIP-205ENST00000533774 MAF1Q9H063 256 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 DCTPP1Q9H773 170 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 RWDD3Q9Y3V2 267 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 MRPL42Q9Y6G3 142 aaKnown RBP14.36□□□□□ -0.11
SVIP-205ENST00000533774 DMXL1Q9Y485 3027 aa14.36□□□□□ -0.11
SVIP-205ENST00000533774 CAND2O75155 1236 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 CFBP00751 764 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 GHRP10912 638 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 MS4A1P11836 297 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 HSD17B4P51659 736 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 HAND2P61296 217 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 BTG3Q14201 252 aaPredicted RBP14.35□□□□□ -0.11
SVIP-205ENST00000533774 GPATCH4Q5T3I0 446 aaKnown RBP14.35□□□□□ -0.11
SVIP-205ENST00000533774 C20orf194Q5TEA3 1177 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 RBM23Q86U06 439 aaKnown RBP14.35□□□□□ -0.11
SVIP-205ENST00000533774 TRIM50Q86XT4 487 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 SUSD6Q92537 303 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 TTC14Q96N46 770 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 ZKSCAN3Q9BRR0 538 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 PLVAPQ9BX97 442 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 LAMA4Q16363 1823 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 CACNA1BQ00975 2339 aa14.35□□□□□ -0.11
SVIP-205ENST00000533774 ZNF292O60281 2723 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 DGKIO75912 1065 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
SVIP-205ENST00000533774 ICAM3P32942 547 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
SVIP-205ENST00000533774 LPIN1Q14693 890 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 PGM5Q15124 567 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 RUFY4Q6ZNE9 571 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 VSIG10LQ86VR7 867 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 MCF2L2Q86YR7 1114 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 TBC1D10CQ8IV04 446 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 CRIPAKQ8N1N5 446 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 KLHL23Q8NBE8 558 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 P2RX5Q93086 422 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 JMJD4Q9H9V9 463 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 MRPL11Q9Y3B7 192 aaKnown RBP14.34□□□□□ -0.11
SVIP-205ENST00000533774 TTC41PQ6P2S7 1318 aa14.34□□□□□ -0.11
SVIP-205ENST00000533774 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
SVIP-205ENST00000533774 PPP1R11O60927 126 aaPredicted RBP14.33□□□□□ -0.12
SVIP-205ENST00000533774 HOXA13P31271 388 aaPredicted RBP14.33□□□□□ -0.12
SVIP-205ENST00000533774 GHRHRQ02643 423 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 MGAT3Q09327 533 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 PTPN21Q16825 1174 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 STOX1Q6ZVD7 989 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 RTN4RL1Q86UN2 441 aaPredicted RBP14.33□□□□□ -0.12
SVIP-205ENST00000533774 RASEFQ8IZ41 740 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 LMBR1Q8WVP7 490 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 POF1BQ8WVV4 589 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 VAT1LQ9HCJ6 419 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 NEDD4P46934 1319 aa14.33□□□□□ -0.12
SVIP-205ENST00000533774 EP300Q09472 2414 aaPredicted RBP14.32□□□□□ -0.12
SVIP-205ENST00000533774 PER2O15055 1255 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 ARP10275 920 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 NBL1P41271 181 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 GATMP50440 423 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 ARHGAP4P98171 946 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 TMEM105Q8N8V8 129 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 ATP8B4Q8TF62 1192 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 RIPOR3Q96MK2 946 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 IRF2BPLQ9H1B7 796 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 MLXIPQ9HAP2 919 aa14.32□□□□□ -0.12
SVIP-205ENST00000533774 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
SVIP-205ENST00000533774 ATF7P17544 494 aaPredicted RBP14.31□□□□□ -0.12
SVIP-205ENST00000533774 PAN2Q504Q3 1202 aaKnown RBP14.31□□□□□ -0.12
SVIP-205ENST00000533774 KCNV1Q6PIU1 500 aa14.31□□□□□ -0.12
SVIP-205ENST00000533774 ERMP1Q7Z2K6 904 aa14.31□□□□□ -0.12
SVIP-205ENST00000533774 ZNF589Q86UQ0 364 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms