RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ZSWIM5Q9P217 1185 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 ANKFY1Q9P2R3 1169 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SCINQ9Y6U3 715 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PNMA6FA0A0J9YX94 578 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PPEF1O14829 653 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PLA2G4BP0C869 781 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PLCG1P19174 1290 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 CCNA1P78396 465 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 USPL1Q5W0Q7 1092 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 NLRP10Q86W26 655 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 LCORLQ8N3X6 602 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 UHMK1Q8TAS1 419 aaKnown RBP7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PIGSQ96S52 555 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PUS7LQ9H0K6 701 aaKnown RBP7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SEPT9Q9UHD8 586 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PTPN22Q9Y2R2 807 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 TCP10L2B9ZVM9 353 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 MOCS3O95396 460 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 MT-ND3P03897 115 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 KRT1P04264 644 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 ARL4AP40617 200 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SCNN1DP51172 638 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 DR1Q01658 176 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 C2orf54Q08AI8 447 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 NR1H3Q13133 447 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 NR5A1Q13285 461 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 KRT31Q15323 416 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 UNC13DQ70J99 1090 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SIRT2Q8IXJ6 389 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 DONSONQ9NYP3 566 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SEPT10Q9P0V9 454 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PAIP2BQ9ULR5 123 aaKnown RBP7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SAMD9LQ8IVG5 1584 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 CCND2P30279 289 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 KCTD2Q14681 263 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SYDE2Q5VT97 1194 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 KRT39Q6A163 491 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 SLFN12LQ6IEE8 588 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 BZW1Q7L1Q6 419 aaKnown RBP7.57□□□□□ -1.2
CTNND1-236ENST00000533667 PCDHB6Q9Y5E3 794 aa7.57□□□□□ -1.2
CTNND1-236ENST00000533667 H7C1W4 665 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 IFNAR2P48551 515 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 PPP1R18Q6NYC8 613 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SMYD4Q8IYR2 804 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 HDAC11Q96DB2 347 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 PAGR1Q9BTK6 254 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ZMYND12Q9H0C1 365 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 OSBPL5Q9H0X9 879 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 FAM96AQ9H5X1 160 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 CEP72Q9P209 647 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SYNGAP1Q96PV0 1343 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 IQANK1A0A1B0GTG1 560 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 PVALEFA0A1B0GWK0 134 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 GFPT2O94808 682 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SASH1O94885 1247 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SKIP12755 728 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 STAT2P52630 851 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 CAV1Q03135 178 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ITKQ08881 620 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SF3A3Q12874 501 aaKnown RBP eCLIP7.56□□□□□ -1.22e-7■■■□□ 14.9
CTNND1-236ENST00000533667 ATG16L1Q676U5 607 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 CLEC17AQ6ZS10 378 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 PI4KBQ9UBF8 816 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ANGPTL2Q9UKU9 493 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 METP08581 1390 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 LGALS16A8MUM7 142 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SMIM24O75264 130 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SLC20A2Q08357 652 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 LRRC41Q15345 812 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 PTPROQ16827 1216 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ALKBH5Q6P6C2 394 aaKnown RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 CENPUQ71F23 418 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 RSPH3Q86UC2 560 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 FOXP4Q8IVH2 680 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SCYL3Q8IZE3 742 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 RASGRP4Q8TDF6 673 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 FAM193BQ96PV7 902 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 RPS6KC1Q96S38 1066 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 UBE2TQ9NPD8 197 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ZBTB1Q9Y2K1 713 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ERBB3P21860 1342 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ATP5HO75947 161 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 FTCDO95954 541 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 APBA3O96018 575 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 LDHAP00338 332 aaKnown RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 LMNAP02545 664 aaKnown RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 PNMA6AP0CW24 399 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 BAG6P46379 1132 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 DYNLL1P63167 89 aaKnown RBP7.56□□□□□ -1.2
CTNND1-236ENST00000533667 PPARDQ03181 441 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 TMED2Q15363 201 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 RUBCNQ92622 972 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 SERPINI1Q99574 410 aa7.56□□□□□ -1.2
CTNND1-236ENST00000533667 ABCA8O94911 1581 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 ATP8B3O60423 1300 aa7.55□□□□□ -1.2
CTNND1-236ENST00000533667 EXOC1LA0A1B0GW35 172 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms