RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CSRNP2Q9H175 543 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 UPF3AQ9H1J1 476 aaKnown RBP13.42□□□□□ -0.26
COMMD9-208ENST00000533643 LRWD1Q9UFC0 647 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 ELP1O95163 1332 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 A6NJR5 290 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 WDR64B1ANS9 1081 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 CTAGE5O15320 804 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 ATG7O95352 703 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 MYCP01106 439 aaPredicted RBP13.41□□□□□ -0.26
COMMD9-208ENST00000533643 LONP1P36776 959 aaKnown RBP13.41□□□□□ -0.26
COMMD9-208ENST00000533643 GJA9P57773 515 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 SPECC1Q5M775 1068 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 ABHD15Q6UXT9 468 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 MIER3Q7Z3K6 550 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
COMMD9-208ENST00000533643 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 PPTC7Q8NI37 304 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 SEPT1Q8WYJ6 367 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 GBP4Q96PP9 640 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 PAK6Q9NQU5 681 aaPredicted RBP13.41□□□□□ -0.26
COMMD9-208ENST00000533643 DISC1Q9NRI5 854 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 TCEAL9Q9UHQ7 104 aa13.41□□□□□ -0.26
COMMD9-208ENST00000533643 SYNRGQ9UMZ2 1314 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 MYADML2A6NDP7 307 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 NOP56O00567 594 aaKnown RBP13.4□□□□□ -0.26
COMMD9-208ENST00000533643 MSCO60682 206 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 ADAMTS4O75173 837 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 PGK1P00558 417 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
COMMD9-208ENST00000533643 CDC25AP30304 524 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 SFNP31947 248 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 JAK3P52333 1124 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 NKX3-2P78367 333 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 EPHA7Q15375 998 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 FSCN1Q16658 493 aaKnown RBP13.4□□□□□ -0.26
COMMD9-208ENST00000533643 CSPP1Q1MSJ5 1256 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 SHC4Q6S5L8 630 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
COMMD9-208ENST00000533643 RDM1Q8NG50 284 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 AK8Q96MA6 479 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
COMMD9-208ENST00000533643 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 RNF208Q9H0X6 261 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 XPNPEP3Q9NQH7 507 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 PCDHA10Q9Y5I2 948 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 CENPFP49454 3210 aa13.4□□□□□ -0.26
COMMD9-208ENST00000533643 TCHHQ07283 1943 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 IGKV6D-21A0A0A0MT36 114 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 PSAPP07602 524 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 MMP3P08254 477 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 TCF7P36402 384 aaPredicted RBP13.39□□□□□ -0.27
COMMD9-208ENST00000533643 BEX3Q00994 111 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 MIS18BP1Q6P0N0 1132 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 KLHDC9Q8NEP7 349 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 EPSTI1Q96J88 318 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 DEFB118Q96PH6 123 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 PCYT2Q99447 389 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 HSD17B14Q9BPX1 270 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 EIF2AK1Q9BQI3 630 aaKnown RBP13.39□□□□□ -0.27
COMMD9-208ENST00000533643 RGL1Q9NZL6 768 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
COMMD9-208ENST00000533643 DOCK5Q9H7D0 1870 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 PRPF40AO75400 957 aaKnown RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 LGR5O75473 907 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 SLITRK3O94933 977 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 C6orf222P0C671 652 aaPredicted RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 SPATA31C1P0DKV0 1188 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 CMA1P23946 247 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 UBA7P41226 1012 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 CPT1AP50416 773 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 DGKDQ16760 1214 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 UTP14CQ5TAP6 766 aaKnown RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 RESP18Q5W5W9 173 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 KRT79Q5XKE5 535 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 SWSAP1Q6NVH7 229 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 CABP7Q86V35 215 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 CCDC60Q8IWA6 550 aaPredicted RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 SYMPKQ92797 1274 aaKnown RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 POLR3CQ9BUI4 534 aaPredicted RBP13.38□□□□□ -0.27
COMMD9-208ENST00000533643 SPC25Q9HBM1 224 aa13.38□□□□□ -0.27
COMMD9-208ENST00000533643 A0A1W2PQ27 194 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 A0A1W2PQ64 194 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 A0A1W2PQD8 194 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 BACH1O14867 736 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 MED24O75448 989 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 LGALS2P05162 132 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 RPA1P27694 616 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 CST5P28325 142 aaPredicted RBP13.37□□□□□ -0.27
COMMD9-208ENST00000533643 CCT6AP40227 531 aaKnown RBP13.37□□□□□ -0.27
COMMD9-208ENST00000533643 CYP4A11Q02928 519 aa13.37□□□□□ -0.27
COMMD9-208ENST00000533643 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms