RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.03□□□□□ -0.86e-8■■□□□ 11.4
COPB1-210ENST00000533533 Q6ZUG5 572 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 FBXO22Q8NEZ5 403 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 DBF4BQ8NFT6 615 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 MTMR8Q96EF0 704 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 C17orf80Q9BSJ5 609 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 C16orf70Q9BSU1 422 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
COPB1-210ENST00000533533 PCDHA1Q9Y5I3 950 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 WDFY4Q6ZS81 3184 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 CACNA1HO95180 2353 aa10.02□□□□□ -0.8
COPB1-210ENST00000533533 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 C17orf102A2RUQ5 167 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 PALM3A6NDB9 673 aaPredicted RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 FAM86C2PA6NEL3 165 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 ZBTB43O43298 467 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 EPB41L2O43491 1005 aaKnown RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 CALM1P0DP23 149 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 CALM2P0DP24 149 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 CALM3P0DP25 149 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 UBA1P22314 1058 aaKnown RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 RPS6KB1P23443 525 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 HOXC8P31273 242 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 EXOSC10Q01780 885 aaKnown RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 TROAPQ12815 778 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 PLEKHG4Q58EX7 1191 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 FAM178BQ8IXR5 827 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 MYOCDQ8IZQ8 938 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 GJD3Q8N144 294 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 CMTR1Q8N1G2 835 aaKnown RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 CCDC82Q8N4S0 544 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 IL31RAQ8NI17 732 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 KCNB2Q92953 911 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 BRF1Q92994 677 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 ATP6V0A1Q93050 837 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 MRPL38Q96DV4 380 aaKnown RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 UPF3BQ9BZI7 483 aaKnown RBP10.02□□□□□ -0.81
COPB1-210ENST00000533533 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 RALGAPA2Q2PPJ7 1873 aa10.02□□□□□ -0.81
COPB1-210ENST00000533533 TTC3P53804 2025 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 GOLGA8AA7E2F4 631 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 GOLGA8BA8MQT2 603 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 H3BRB1 525 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 SEC24BO95487 1268 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 SMIM10L2AP0DMW4 78 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 SMIM10L2BP0DMW5 78 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 CCND2P30279 289 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 GNAQP50148 359 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 APOBRQ0VD83 1088 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 PTPROQ16827 1216 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 PTCRAQ6ISU1 281 aaPredicted RBP10.01□□□□□ -0.81
COPB1-210ENST00000533533 APOA5Q6Q788 366 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 RUFY3Q7L099 469 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.814e-7■□□□□ 11.1
COPB1-210ENST00000533533 SAMD11Q96NU1 681 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 PIGSQ96S52 555 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 TUT1Q9H6E5 874 aaKnown RBP10.01□□□□□ -0.81
COPB1-210ENST00000533533 MLXIPQ9HAP2 919 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 SEC63Q9UGP8 760 aaKnown RBP10.01□□□□□ -0.81
COPB1-210ENST00000533533 BRPF3Q9ULD4 1205 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 ATG2AQ2TAZ0 1938 aa10.01□□□□□ -0.81
COPB1-210ENST00000533533 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
COPB1-210ENST00000533533 TREHO43280 583 aa10□□□□□ -0.81
COPB1-210ENST00000533533 CAND2O75155 1236 aa10□□□□□ -0.81
COPB1-210ENST00000533533 LGALS2P05162 132 aa10□□□□□ -0.81
COPB1-210ENST00000533533 POLR2MP0CAP2 368 aa10□□□□□ -0.81
COPB1-210ENST00000533533 IL9P15248 144 aa10□□□□□ -0.81
COPB1-210ENST00000533533 SSTR3P32745 418 aaPredicted RBP10□□□□□ -0.81
COPB1-210ENST00000533533 TRAF1Q13077 416 aa10□□□□□ -0.81
COPB1-210ENST00000533533 RTN1Q16799 776 aa10□□□□□ -0.81
COPB1-210ENST00000533533 SLC35G1Q2M3R5 365 aa10□□□□□ -0.81
COPB1-210ENST00000533533 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
COPB1-210ENST00000533533 TIGD5Q53EQ6 642 aa10□□□□□ -0.81
COPB1-210ENST00000533533 SGMS1Q86VZ5 419 aa10□□□□□ -0.81
COPB1-210ENST00000533533 FCHSD1Q86WN1 690 aa10□□□□□ -0.81
COPB1-210ENST00000533533 FANCBQ8NB91 859 aa10□□□□□ -0.81
COPB1-210ENST00000533533 NEK9Q8TD19 979 aa10□□□□□ -0.81
COPB1-210ENST00000533533 SEPT8Q92599 483 aa10□□□□□ -0.81
COPB1-210ENST00000533533 TOP1MTQ969P6 601 aa10□□□□□ -0.81
COPB1-210ENST00000533533 RRP36Q96EU6 259 aaKnown RBP10□□□□□ -0.81
COPB1-210ENST00000533533 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
COPB1-210ENST00000533533 YME1L1Q96TA2 773 aa10□□□□□ -0.81
COPB1-210ENST00000533533 MAP3K14Q99558 947 aa10□□□□□ -0.81
COPB1-210ENST00000533533 LZTS2Q9BRK4 669 aa10□□□□□ -0.81
COPB1-210ENST00000533533 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
COPB1-210ENST00000533533 RNPEPQ9H4A4 650 aa10□□□□□ -0.81
COPB1-210ENST00000533533 BCAS3Q9H6U6 928 aa10□□□□□ -0.81
COPB1-210ENST00000533533 RIOX1Q9H6W3 641 aa10□□□□□ -0.81
COPB1-210ENST00000533533 PDRG1Q9NUG6 133 aa10□□□□□ -0.81
COPB1-210ENST00000533533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.99□□□□□ -0.81
COPB1-210ENST00000533533 hCG_1642624A0A1W2PR95 340 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 H3BNC9 293 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 H3BQ06 376 aaPredicted RBP9.99□□□□□ -0.81
COPB1-210ENST00000533533 NOP56O00567 594 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms