RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 GPNMBQ14956 572 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 TRAF7Q6Q0C0 670 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 TRIM22Q8IYM9 498 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 SLC9A7Q96T83 725 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 SMARCAD1Q9H4L7 1026 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 ZNF576Q9H609 170 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 JPH1Q9HDC5 661 aaPredicted RBP25.41■■□□□ 1.66
BEST1-207ENST00000533521 PDRG1Q9NUG6 133 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 ERAP1Q9NZ08 941 aa25.41■■□□□ 1.66
BEST1-207ENST00000533521 LGR5O75473 907 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 ZNF200P98182 395 aaPredicted RBP25.4■■□□□ 1.66
BEST1-207ENST00000533521 CPLX2Q6PUV4 134 aaKnown RBP25.4■■□□□ 1.66
BEST1-207ENST00000533521 RPAINQ86UA6 219 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 SDF4Q9BRK5 362 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 SLC26A6Q9BXS9 759 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 UPF3BQ9BZI7 483 aaKnown RBP25.4■■□□□ 1.66
BEST1-207ENST00000533521 FTOQ9C0B1 505 aaKnown RBP eCLIP25.4■■□□□ 1.66
BEST1-207ENST00000533521 TMEM260Q9NX78 707 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 SLC9A2Q9UBY0 812 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 PCDHA11Q9Y5I1 949 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 GBF1Q92538 1859 aa25.4■■□□□ 1.66
BEST1-207ENST00000533521 GRXCR1A8MXD5 290 aa25.39■■□□□ 1.66
BEST1-207ENST00000533521 EFCAB14O75071 495 aa25.39■■□□□ 1.66
BEST1-207ENST00000533521 ATP2A2P16615 1042 aaKnown RBP25.39■■□□□ 1.66
BEST1-207ENST00000533521 CCT2P78371 535 aaKnown RBP25.39■■□□□ 1.66
BEST1-207ENST00000533521 CNKSR3Q6P9H4 555 aa25.39■■□□□ 1.66
BEST1-207ENST00000533521 TRIM50Q86XT4 487 aa25.39■■□□□ 1.66
BEST1-207ENST00000533521 CYP2W1Q8TAV3 490 aa25.39■■□□□ 1.66
BEST1-207ENST00000533521 TNPO1Q92973 898 aaKnown RBP25.39■■□□□ 1.66
BEST1-207ENST00000533521 FAM161BQ96MY7 647 aa25.39■■□□□ 1.66
BEST1-207ENST00000533521 NCOA5Q9HCD5 579 aaKnown RBP25.39■■□□□ 1.66
BEST1-207ENST00000533521 AGO4Q9HCK5 861 aaKnown RBP25.39■■□□□ 1.66
BEST1-207ENST00000533521 CHD9Q3L8U1 2897 aa25.38■■□□□ 1.65
BEST1-207ENST00000533521 RPLP2P05387 115 aaKnown RBP25.38■■□□□ 1.65
BEST1-207ENST00000533521 SSRP1Q08945 709 aaKnown RBP25.38■■□□□ 1.65
BEST1-207ENST00000533521 ZNF618Q5T7W0 954 aa25.38■■□□□ 1.65
BEST1-207ENST00000533521 UTP14CQ5TAP6 766 aaKnown RBP25.38■■□□□ 1.65
BEST1-207ENST00000533521 JAKMIP3Q5VZ66 844 aa25.38■■□□□ 1.65
BEST1-207ENST00000533521 WNT8BQ93098 351 aa25.38■■□□□ 1.65
BEST1-207ENST00000533521 PGBD1Q96JS3 809 aa25.38■■□□□ 1.65
BEST1-207ENST00000533521 TELO2Q9Y4R8 837 aa25.38■■□□□ 1.65
BEST1-207ENST00000533521 ABHD14A-ACY1A0A1B0GW23 586 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 ZBBXA8MT70 800 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 CPLX1O14810 134 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 TREHO43280 583 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 NBNO60934 754 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 ATG7O95352 703 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 DEXIO95424 95 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 ARP10275 920 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 CIITAP33076 1130 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 ZNF76P36508 570 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 PBX2P40425 430 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 SP4Q02446 784 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 ANKRD1Q15327 319 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 SETD4Q9NVD3 440 aa25.37■■□□□ 1.65
BEST1-207ENST00000533521 IGLV3-22A0A075B6J6 115 aa25.36■■□□□ 1.65
BEST1-207ENST00000533521 SLC26A2P50443 739 aa25.36■■□□□ 1.65
BEST1-207ENST00000533521 SETQ01105 290 aaPredicted RBP25.36■■□□□ 1.65
BEST1-207ENST00000533521 GALNT17Q6IS24 598 aa25.36■■□□□ 1.65
BEST1-207ENST00000533521 TAF2Q6P1X5 1199 aa25.36■■□□□ 1.65
BEST1-207ENST00000533521 PLPPR4Q7Z2D5 763 aa25.36■■□□□ 1.65
BEST1-207ENST00000533521 LMBR1Q8WVP7 490 aa25.36■■□□□ 1.65
BEST1-207ENST00000533521 C22orf23Q9BZE7 217 aa25.36■■□□□ 1.65
BEST1-207ENST00000533521 MBLAC1A4D2B0 266 aaPredicted RBP25.35■■□□□ 1.65
BEST1-207ENST00000533521 RSPH10B2B2RC85 870 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 FAM86B1E9PN63 330 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 CDKL5O76039 1030 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 FAM86B2P0C5J1 330 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 RSPH10BP0C881 870 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 THPOP40225 353 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 ACTR2P61160 394 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 ITGB3BPQ13352 177 aaPredicted RBP25.35■■□□□ 1.65
BEST1-207ENST00000533521 FAM26DQ5JW98 314 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 PLA2G4DQ86XP0 818 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 GLG1Q92896 1179 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 AZI2Q9H6S1 392 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 SLC28A3Q9HAS3 691 aa25.35■■□□□ 1.65
BEST1-207ENST00000533521 IGKV6D-21A0A0A0MT36 114 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 RRN3P2A6NIE6 340 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 USP11P51784 963 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 MBTPS1Q14703 1052 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 GRIN2CQ14957 1233 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 PCYT2Q99447 389 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 TBC1D22BQ9NU19 505 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 PKD2L1Q9P0L9 805 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 VPS54Q9P1Q0 977 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 MYO9BQ13459 2157 aa25.34■■□□□ 1.65
BEST1-207ENST00000533521 KCNJ6P48051 423 aa25.33■■□□□ 1.65
BEST1-207ENST00000533521 PPFIA1Q13136 1202 aa25.33■■□□□ 1.65
BEST1-207ENST00000533521 IKBKEQ14164 716 aa25.33■■□□□ 1.65
BEST1-207ENST00000533521 HERC6Q8IVU3 1022 aa25.33■■□□□ 1.65
BEST1-207ENST00000533521 DAGLBQ8NCG7 672 aa25.33■■□□□ 1.65
BEST1-207ENST00000533521 YBX2Q9Y2T7 364 aaKnown RBP25.33■■□□□ 1.65
BEST1-207ENST00000533521 KIF28PB7ZC32 967 aa25.32■■□□□ 1.64
BEST1-207ENST00000533521 IPO5O00410 1097 aaKnown RBP25.32■■□□□ 1.64
BEST1-207ENST00000533521 DHX15O43143 795 aaKnown RBP25.32■■□□□ 1.64
BEST1-207ENST00000533521 PFKFB2O60825 505 aa25.32■■□□□ 1.64
BEST1-207ENST00000533521 NLRP5P59047 1200 aa25.32■■□□□ 1.64
BEST1-207ENST00000533521 WDR5P61964 334 aaKnown RBP25.32■■□□□ 1.64
BEST1-207ENST00000533521 MYLIPQ8WY64 445 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms