RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 AGXT2Q9BYV1 514 aa13.56□□□□□ -0.24
RAD50-209ENST00000533482 TRIM9Q9C026 710 aa13.56□□□□□ -0.24
RAD50-209ENST00000533482 JRKLQ9Y4A0 524 aa13.56□□□□□ -0.24
RAD50-209ENST00000533482 STK24Q9Y6E0 443 aa13.56□□□□□ -0.24
RAD50-209ENST00000533482 GFPT1Q06210 699 aaPredicted RBP13.56□□□□□ -0.24
RAD50-209ENST00000533482 DMP1Q13316 513 aaPredicted RBP13.56□□□□□ -0.24
RAD50-209ENST00000533482 AGPAT5Q9NUQ2 364 aa13.56□□□□□ -0.24
RAD50-209ENST00000533482 SLIT1O75093 1534 aa13.56□□□□□ -0.24
RAD50-209ENST00000533482 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
RAD50-209ENST00000533482 A0A1B0GTH6 734 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 NCK2O43639 380 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 TERF2Q15554 542 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 TAB3Q8N5C8 712 aaPredicted RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 ANKS4BQ8N8V4 417 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 IFNB1P01574 187 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 OSTNP61366 133 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 ZRSR2Q15696 482 aaKnown RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 RCSD1Q6JBY9 416 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 RUFY4Q6ZNE9 571 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 RBM43Q6ZSC3 357 aaKnown RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 ZNF668Q96K58 619 aaPredicted RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 AP1M1Q9BXS5 423 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 MARK3P27448 753 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 LRRC63Q05C16 580 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 CABS1Q96KC9 395 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 NACC1Q96RE7 527 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 RGL1Q9NZL6 768 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 AGTPBP1Q9UPW5 1226 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 NOD1Q9Y239 953 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 ABCB11O95342 1321 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 CNTNAP5Q8WYK1 1306 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 INPP5BP32019 993 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 NR1I3Q14994 352 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 ALKBH5Q6P6C2 394 aaKnown RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 CAPN12Q6ZSI9 719 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 ZNF710Q8N1W2 664 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 PPP1R14CQ8TAE6 165 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 FAM71BQ8TC56 605 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 RMDN3Q96TC7 470 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 PSMD1Q99460 953 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 WDR11Q9BZH6 1224 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 IQCGQ9H095 443 aaKnown RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 NSRP1Q9H0G5 558 aaKnown RBP13.55□□□□□ -0.24
RAD50-209ENST00000533482 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
RAD50-209ENST00000533482 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 SAMD15Q9P1V8 674 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 hCG_1984214I3L0E3 225 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 NDUFB10O96000 172 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 PSMC2P35998 433 aaKnown RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 CCT5P48643 541 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 ZNF713Q8N859 430 aaPredicted RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 PACSIN2Q9UNF0 486 aaPredicted RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 BCL9O00512 1426 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 ESYT3A0FGR9 886 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 INO80B-WBP1J3KQ70 363 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 TADA3O75528 432 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 PEX3P56589 373 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 COASYQ13057 564 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 Q3C1V9 767 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 COL23A1Q86Y22 540 aaPredicted RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 INO80BQ9C086 356 aaPredicted RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 STMN4Q9H169 189 aaPredicted RBP13.54□□□□□ -0.24
RAD50-209ENST00000533482 MED4Q9NPJ6 270 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 PTPN22Q9Y2R2 807 aa13.54□□□□□ -0.24
RAD50-209ENST00000533482 PDHBP11177 359 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 MYL7Q01449 175 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 SBK1Q52WX2 424 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 FAM47CQ5HY64 1035 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 RAD54LQ92698 747 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 CAPS2Q9BXY5 557 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 NPHP3-ACAD11A0A0J9YXS1 232 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 ZBTB16Q05516 673 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 KCTD2Q14681 263 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 NFRKBQ6P4R8 1299 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 BUB1BO60566 1050 aaPredicted RBP13.53□□□□□ -0.24
RAD50-209ENST00000533482 ATP1A1P05023 1023 aaKnown RBP13.53□□□□□ -0.24
RAD50-209ENST00000533482 RASA3Q14644 834 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 LIN9Q5TKA1 542 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 RNF207Q6ZRF8 634 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 ANKRD42Q8N9B4 389 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 SLC7A3Q8WY07 619 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 KCNH2Q12809 1159 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 EZH2Q15910 746 aaKnown RBP13.53□□□□□ -0.24
RAD50-209ENST00000533482 IWS1Q96ST2 819 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 PLEKHG2Q9H7P9 1386 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 KMT5AQ9NQR1 393 aa13.53□□□□□ -0.24
RAD50-209ENST00000533482 ADAM21Q9UKJ8 722 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms