RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 NEK11Q8NG66 645 aa21.32■■□□□ 1
UBXN1-215ENST00000533476 LACRTQ9GZZ8 138 aa21.32■■□□□ 1
UBXN1-215ENST00000533476 ARHGAP20Q9P2F6 1191 aa21.32■■□□□ 1
UBXN1-215ENST00000533476 IGLV3-22A0A075B6J6 115 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 LCA5LO95447 670 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 ZNF76P36508 570 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 PSMC6P62333 389 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 RAD51AP2Q09MP3 1159 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 SPA17Q15506 151 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 ZNF771Q7L3S4 317 aaPredicted RBP21.31■■□□□ 1
UBXN1-215ENST00000533476 TRIM59Q8IWR1 403 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 MSANTD4Q8NCY6 345 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 TANGO6Q9C0B7 1094 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 RANBP17Q9H2T7 1088 aaKnown RBP21.31■■□□□ 1
UBXN1-215ENST00000533476 TFR2Q9UP52 801 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 ATAD5Q96QE3 1844 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 CTAGE15A4D2H0 777 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 LRRC53A6NM62 1247 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 ZNF263O14978 683 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 TBC1D12O60347 775 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 PLA2G6O60733 806 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 CTAGE8P0CG41 777 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 PABPC4Q13310 644 aaKnown RBP eCLIP21.31■■□□□ 14e-8■■□□□ 13.2
UBXN1-215ENST00000533476 BRD3Q15059 726 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 PDXDC1Q6P996 788 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 CTAGE6Q86UF2 777 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 CTAGE4Q8IX94 777 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 CHURC1Q8WUH1 139 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 UBXN6Q9BZV1 441 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 ANKZF1Q9H8Y5 726 aa21.31■■□□□ 1
UBXN1-215ENST00000533476 MEIS1O00470 390 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 PLEKP08567 350 aaPredicted RBP21.3■■□□□ 1
UBXN1-215ENST00000533476 KCNMA1Q12791 1236 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 PAPD7Q5XG87 772 aaKnown RBP21.3■■□□□ 1
UBXN1-215ENST00000533476 RRAGAQ7L523 313 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 MTMR14Q8NCE2 650 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 CYP2W1Q8TAV3 490 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 REEP2Q9BRK0 252 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 VPS33BQ9H267 617 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 VCPKMTQ9H867 229 aa21.3■■□□□ 1
UBXN1-215ENST00000533476 ZNF277Q9NRM2 450 aaPredicted RBP21.3■■□□□ 1
UBXN1-215ENST00000533476 CCDC151A5D8V7 595 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 SEC31AO94979 1220 aaKnown RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 KIF11P52732 1056 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 CYP27A1Q02318 531 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 KIF5AQ12840 1032 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 EPM2AIP1Q7L775 607 aaPredicted RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 EIF2AK1Q9BQI3 630 aaKnown RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 ZHX3Q9H4I2 956 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 SH2D4AQ9H788 454 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 ARFGAP3Q9NP61 516 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 CEP72Q9P209 647 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 ZHX1Q9UKY1 873 aaPredicted RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 FAM184BQ9ULE4 1060 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 UTRNP46939 3433 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 ANO9A1A5B4 782 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 GCOM1H8Y6P7 765 aaPredicted RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 EYA4O95677 639 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 TFRCP02786 760 aaKnown RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 POLR2MP0CAP2 368 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 EIF4A3P38919 411 aaKnown RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 FAM83AQ86UY5 434 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 FAM160B2Q86V87 743 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 SFR1Q86XK3 245 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 SMCR8Q8TEV9 937 aaPredicted RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 NUCKS1Q9H1E3 243 aaKnown RBP21.29■■□□□ 1
UBXN1-215ENST00000533476 RAB21Q9UL25 225 aa21.29■■□□□ 1
UBXN1-215ENST00000533476 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.29■■□□□ 1
UBXN1-215ENST00000533476 CFBP00751 764 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 ATP1A1P05023 1023 aaKnown RBP21.28■■□□□ 1
UBXN1-215ENST00000533476 ERCC3P19447 782 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 CACNA2D4Q7Z3S7 1137 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 CCDC155Q8N6L0 562 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 AGBL3Q8NEM8 1001 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 SYN2Q92777 582 aaPredicted RBP21.28■■□□□ 1
UBXN1-215ENST00000533476 WDR18Q9BV38 432 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 IFIH1Q9BYX4 1025 aaKnown RBP21.28■■□□□ 1
UBXN1-215ENST00000533476 EHMT1Q9H9B1 1298 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 VEZTQ9HBM0 779 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 TRAF3IP3Q9Y228 551 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 ZBTB12Q9Y330 459 aaPredicted RBP21.28■■□□□ 1
UBXN1-215ENST00000533476 MRPL11Q9Y3B7 192 aaKnown RBP21.28■■□□□ 1
UBXN1-215ENST00000533476 SAR1BQ9Y6B6 198 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 SMCHD1A6NHR9 2005 aa21.28■■□□□ 1
UBXN1-215ENST00000533476 EML1O00423 815 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 CETN3O15182 167 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 USO1O60763 962 aaKnown RBP21.27■■□□□ 1
UBXN1-215ENST00000533476 TBC1D8O95759 1140 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 CASP5P51878 434 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 MAPK8IP2Q13387 824 aaPredicted RBP21.27■■□□□ 1
UBXN1-215ENST00000533476 ADAM9Q13443 819 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 CCDC174Q6PII3 467 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 SECISBP2LQ93073 1101 aaKnown RBP21.27■■□□□ 1
UBXN1-215ENST00000533476 DEF6Q9H4E7 631 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 TUFT1Q9NNX1 390 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 RABGAP1Q9Y3P9 1069 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 PCDHA13Q9Y5I0 950 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 RBBP6Q7Z6E9 1792 aaKnown RBP21.27■■□□□ 1
UBXN1-215ENST00000533476 SSU72P8A0A1W2PR75 194 aa21.27■■□□□ 1
UBXN1-215ENST00000533476 NOL4O94818 638 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms