RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 hCG_1984214I3L0E3 225 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 MAFGO15525 162 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 EFCAB14O75071 495 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 CAND2O75155 1236 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 LGR5O75473 907 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
CLCF1-202ENST00000533438 RSPH10BP0C881 870 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 CDC27P30260 824 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 TCF7P36402 384 aaPredicted RBP12.96□□□□□ -0.33
CLCF1-202ENST00000533438 THPOP40225 353 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 SP4Q02446 784 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 MTMR1Q13613 665 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 PPP1R18Q6NYC8 613 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 TMCO2Q7Z6W1 182 aaPredicted RBP12.96□□□□□ -0.33
CLCF1-202ENST00000533438 TEX2Q8IWB9 1127 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.33
CLCF1-202ENST00000533438 PPM1EQ8WY54 764 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 C1QTNF1Q9BXJ1 281 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 SETD4Q9NVD3 440 aa12.96□□□□□ -0.33
CLCF1-202ENST00000533438 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
CLCF1-202ENST00000533438 NCOR1O75376 2440 aa12.96□□□□□ -0.34
CLCF1-202ENST00000533438 GSTTP1A0A1W2PQM5 241 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 LCHNA4D1U4 455 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 GOLGA8AA7E2F4 631 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 GOLGA8BA8MQT2 603 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 STXBP3O00186 592 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 TLL1O43897 1013 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 GJB5O95377 273 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 GNAT1P11488 350 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 HSPA4P34932 840 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 CLK2P49760 499 aaKnown RBP12.95□□□□□ -0.34
CLCF1-202ENST00000533438 NAPAP54920 295 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 IKBKEQ14164 716 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 CCDC85BQ15834 202 aaPredicted RBP12.95□□□□□ -0.34
CLCF1-202ENST00000533438 AAK1Q2M2I8 961 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 UTP14CQ5TAP6 766 aaKnown RBP12.95□□□□□ -0.34
CLCF1-202ENST00000533438 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 DBF4BQ8NFT6 615 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 SEPT1Q8WYJ6 367 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 OSBPL7Q9BZF2 842 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
CLCF1-202ENST00000533438 EHMT1Q9H9B1 1298 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 CERS4Q9HA82 394 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 JADE2Q9NQC1 790 aa12.95□□□□□ -0.34
CLCF1-202ENST00000533438 V9GY48 417 aaPredicted RBP12.95□□□□□ -0.34
CLCF1-202ENST00000533438 NID2Q14112 1375 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 NRCAMQ92823 1304 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 RFXAPO00287 272 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 FOSP01100 380 aaPredicted RBP12.94□□□□□ -0.34
CLCF1-202ENST00000533438 CPA1P15085 419 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 PLEKHG4Q58EX7 1191 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 FBXL16Q8N461 479 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 RAD9AQ99638 391 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 MXRA8Q9BRK3 442 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 AGXT2Q9BYV1 514 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 BARHL2Q9NY43 387 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 SNX14Q9Y5W7 946 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 MTCH2Q9Y6C9 303 aa12.94□□□□□ -0.34
CLCF1-202ENST00000533438 PRRC2BQ5JSZ5 2229 aaKnown RBP12.93□□□□□ -0.34
CLCF1-202ENST00000533438 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 EIF5BO60841 1220 aaKnown RBP12.93□□□□□ -0.34
CLCF1-202ENST00000533438 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
CLCF1-202ENST00000533438 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
CLCF1-202ENST00000533438 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLCF1-202ENST00000533438 ADCY7P51828 1080 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 APOBRQ0VD83 1088 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 AP3B2Q13367 1082 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 FAM26DQ5JW98 314 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLCF1-202ENST00000533438 Q6ZUG5 572 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 RPAINQ86UA6 219 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 CYP2W1Q8TAV3 490 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 ARNTL2Q8WYA1 636 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
CLCF1-202ENST00000533438 ZBED2Q9BTP6 218 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 ANO3Q9BYT9 981 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 KCNH7Q9NS40 1196 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 COG5Q9UP83 839 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 NLRC5Q86WI3 1866 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
CLCF1-202ENST00000533438 NFASCO94856 1347 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 LOXHD1Q8IVV2 1947 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 MBLAC1A4D2B0 266 aaPredicted RBP12.92□□□□□ -0.34
CLCF1-202ENST00000533438 LPXNO60711 386 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 CTSHP09668 335 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 SREBF1P36956 1147 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 PFKFB3Q16875 520 aaPredicted RBP12.92□□□□□ -0.34
CLCF1-202ENST00000533438 BRF1Q92994 677 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 PCYT2Q99447 389 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 SMARCAD1Q9H4L7 1026 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 JPH1Q9HDC5 661 aaPredicted RBP12.92□□□□□ -0.34
CLCF1-202ENST00000533438 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 ERAP1Q9NZ08 941 aa12.92□□□□□ -0.34
CLCF1-202ENST00000533438 PKD2L1Q9P0L9 805 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms