RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	PCDHB4	Q9Y5E5	795 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	SBNO2	Q9Y2G9	1366 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	COL6A2	P12110	1019 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	NCL	P19338	710 aa	Known RBP	4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	SOX5	P35711	763 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	SART3	Q15020	963 aa	Known RBP	4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	HHIPL2	Q6UWX4	724 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	FAM177A1	Q8N128	213 aa	Predicted RBP	4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	C2orf69	Q8N8R5	385 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	IGSF22	Q8N9C0	903 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	PIP4K2C	Q8TBX8	421 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	MCOLN1	Q9GZU1	580 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	SPC25	Q9HBM1	224 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	MYOT	Q9UBF9	498 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	MAPRE3	Q9UPY8	281 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	ZKSCAN5	Q9Y2L8	839 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	COQ6	Q9Y2Z9	468 aa		4.76	□□□□□ -1.65
LMO7-223	ENST00000533299	LOC105371045	A0A1W2PR82	267 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	SGSM2	O43147	1006 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	DNAJC6	O75061	913 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	TADA3	O75528	432 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	NCAM1	P13591	858 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	PDE6A	P16499	860 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	PFKL	P17858	780 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	POU3F2	P20265	443 aa	Predicted RBP	4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	VIPR1	P32241	457 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	LACTB	P83111	547 aa	Predicted RBP	4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	PIK3R6	Q5UE93	754 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	ARHGAP36	Q6ZRI8	547 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	KIF18B	Q86Y91	864 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	SP8	Q8IXZ3	490 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	UHMK1	Q8TAS1	419 aa	Known RBP	4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	CHAC2	Q8WUX2	184 aa		4.75	□□□□□ -1.65
LMO7-223	ENST00000533299	TEX51	A0A1B0GUA7	166 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	PDE8A	O60658	829 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	HIP1R	O75146	1068 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	CKM	P06732	381 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	CPE	P16870	476 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	KRT15	P19012	456 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	MASP1	P48740	699 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	TMEM177	Q53S58	311 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	HABP4	Q5JVS0	413 aa	Known RBP	4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	ZC3H18	Q86VM9	953 aa	Known RBP	4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	RNF38	Q9H0F5	515 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	CAAP1	Q9H8G2	361 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	RXFP1	Q9HBX9	757 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	PCDH18	Q9HCL0	1135 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	SIT1	Q9Y3P8	196 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	SLC12A8	A0AV02	714 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299		M0R2C6	588 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	NKRF	O15226	690 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	GAS7	O60861	476 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	FSHB	P01225	129 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	GJA4	P35212	333 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	SCNN1B	P51168	640 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	ZNF460	Q14592	562 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	FIGN	Q5HY92	759 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	ETV3L	Q6ZN32	361 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	KCTD1	Q719H9	257 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	OSTM1	Q86WC4	334 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	CISD2	Q8N5K1	135 aa	Known RBP	4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	CHST14	Q8NCH0	376 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	ZCRB1	Q8TBF4	217 aa	Known RBP	4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	TARS2	Q9BW92	718 aa	Known RBP	4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	IFT57	Q9NWB7	429 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	ASH2L	Q9UBL3	628 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	CBLC	Q9ULV8	474 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	SRPK3	Q9UPE1	567 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	FAN1	Q9Y2M0	1017 aa		4.74	□□□□□ -1.65
LMO7-223	ENST00000533299	TCRBV5S2	A0A599	114 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	ANKRD62	A6NC57	917 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	ZNF561-AS1	K7EIQ3	104 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	SLC27A2	O14975	620 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	KPNA6	O60684	536 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	KCNA6	P17658	529 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	IBSP	P21815	317 aa	Predicted RBP	4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	CNGA1	P29973	690 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	ZNF200	P98182	395 aa	Predicted RBP	4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	DDX46	Q7L014	1031 aa	Known RBP	4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	OVCH1	Q7RTY7	1134 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	FRMD5	Q7Z6J6	570 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	FILIP1	Q7Z7B0	1213 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	OR2W6P	Q8NHA6	318 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	TTLL11	Q8NHH1	800 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	FEZF2	Q8TBJ5	459 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	TOE1	Q96GM8	510 aa	Known RBP	4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	ORAI3	Q9BRQ5	295 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	BOC	Q9BWV1	1114 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
LMO7-223	ENST00000533299	ATP23	Q9Y6H3	246 aa		4.73	□□□□□ -1.65
LMO7-223	ENST00000533299		A0A087X0B3	334 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	MATN3	O15232	486 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	CLASP2	O75122	1294 aa	Known RBP	4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	GLRX3	O76003	335 aa	Known RBP	4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	STAT3	P40763	770 aa		4.72	□□□□□ -1.65
LMO7-223	ENST00000533299	EPHA5	P54756	1037 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms