RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 MS4A14Q96JA4 679 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 RNPC3Q96LT9 517 aaKnown RBP10.27□□□□□ -0.76
BDNF-216ENST00000532997 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.27□□□□□ -0.76
BDNF-216ENST00000532997 TRIM31Q9BZY9 425 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 HDAC9Q9UKV0 1011 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 LEMD3Q9Y2U8 911 aa10.27□□□□□ -0.76
BDNF-216ENST00000532997 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 CAMTA2O94983 1202 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 DHX9Q08211 1270 aaKnown RBP10.27□□□□□ -0.77
BDNF-216ENST00000532997 NBPF9Q3BBW0 867 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 CD302Q8IX05 232 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 USP38Q8NB14 1042 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 SH3GL2Q99962 352 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 TTYH3Q9C0H2 523 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 TCEAL9Q9UHQ7 104 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 NOVA2Q9UNW9 492 aaKnown RBP10.27□□□□□ -0.77
BDNF-216ENST00000532997 SPDYE3A6NKU9 549 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
BDNF-216ENST00000532997 USP17L2Q6R6M4 530 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 C4orf32Q8N8J7 132 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 PLCD4Q9BRC7 762 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 TLR10Q9BXR5 811 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 DPH5Q9H2P9 285 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 EHMT1Q9H9B1 1298 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 VEZTQ9HBM0 779 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 GDF3Q9NR23 364 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 KLC4Q9NSK0 619 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 MAD2L2Q9UI95 211 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 KIAA1024Q9UPX6 916 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 FRMD4BQ9Y2L6 1034 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 TJP1Q07157 1748 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 CES2O00748 559 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 CETN2P41208 172 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 YTHDF3Q7Z739 585 aaKnown RBP10.27□□□□□ -0.77
BDNF-216ENST00000532997 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 TBC1D22AQ8WUA7 517 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 HDAC7Q8WUI4 952 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 FMO2Q99518 471 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 CCDC77Q9BR77 488 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 HOMER3Q9NSC5 361 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 SMARCAL1Q9NZC9 954 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 GGA2Q9UJY4 613 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 SIK3Q9Y2K2 1263 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 DAAM1Q9Y4D1 1078 aa10.27□□□□□ -0.77
BDNF-216ENST00000532997 TIAM2Q8IVF5 1701 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 PLA2G4BP0C869 781 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 CDK8P49336 464 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 MIIPQ5JXC2 388 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 KLHDC7AQ5VTJ3 777 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 FOXR2Q6PJQ5 311 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 SYCP3Q8IZU3 236 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 MYCBPAPQ8TBZ2 947 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 HPS3Q969F9 1004 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 RUNDC3BQ96NL0 473 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 ODF2LQ9ULJ1 636 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 PALM3A6NDB9 673 aaPredicted RBP10.26□□□□□ -0.77
BDNF-216ENST00000532997 SART1O43290 800 aaKnown RBP10.26□□□□□ -0.77
BDNF-216ENST00000532997 FSBPO95073 299 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 BTDP43251 543 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 CLNS1AP54105 237 aaKnown RBP10.26□□□□□ -0.77
BDNF-216ENST00000532997 ZRSR2Q15696 482 aaKnown RBP10.26□□□□□ -0.77
BDNF-216ENST00000532997 NPY5RQ15761 445 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 GPATCH4Q5T3I0 446 aaKnown RBP10.26□□□□□ -0.77
BDNF-216ENST00000532997 CNPY4Q8N129 248 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 PSMD1Q99460 953 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 POTEMA6NI47 508 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 SMIM23A6NLE4 172 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 RAD51CO43502 376 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 HSPA9P38646 679 aaKnown RBP10.26□□□□□ -0.77
BDNF-216ENST00000532997 KCNH2Q12809 1159 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 KIAA0895Q8NCT3 520 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 CASKIN2Q8WXE0 1202 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 CASZ1Q86V15 1759 aa10.26□□□□□ -0.77
BDNF-216ENST00000532997 AGPSO00116 658 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 BUB1BO60566 1050 aaPredicted RBP10.25□□□□□ -0.77
BDNF-216ENST00000532997 CTNND1O60716 968 aaKnown RBP10.25□□□□□ -0.77
BDNF-216ENST00000532997 LCA5LO95447 670 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 KLRC1P26715 233 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 USP11P51784 963 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 LACTBP83111 547 aaPredicted RBP10.25□□□□□ -0.77
BDNF-216ENST00000532997 PPP1R7Q15435 360 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 TSEN2Q8NCE0 465 aaKnown RBP10.25□□□□□ -0.77
BDNF-216ENST00000532997 C1orf131Q8NDD1 294 aaKnown RBP10.25□□□□□ -0.77
BDNF-216ENST00000532997 NEK9Q8TD19 979 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 SH3RF3Q8TEJ3 882 aaPredicted RBP10.25□□□□□ -0.77
BDNF-216ENST00000532997 VTI1AQ96AJ9 217 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 EHD2Q9NZN4 543 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 FRMPD2Q68DX3 1309 aaPredicted RBP10.25□□□□□ -0.77
BDNF-216ENST00000532997 GCNT3O95395 438 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 SMTNP53814 917 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 EDRF1Q3B7T1 1238 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 MEI1Q5TIA1 1274 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 CCDC63Q8NA47 563 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 MTMR8Q96EF0 704 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 CYFIP2Q96F07 1278 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 AP1M1Q9BXS5 423 aa10.25□□□□□ -0.77
BDNF-216ENST00000532997 TRIM7Q9C029 511 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms