RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 EFCAB14O75071 495 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 HSPA4P34932 840 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 ADD1P35611 737 aaKnown RBP18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 ZNF713Q8N859 430 aaPredicted RBP18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 DBF4BQ8NFT6 615 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 SEPT1Q8WYJ6 367 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 MXRA8Q9BRK3 442 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 EHMT1Q9H9B1 1298 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 BARHL2Q9NY43 387 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 PKD2L1Q9P0L9 805 aa18.89■□□□□ 0.61
CAVIN3-204ENST00000532354 PTPRSQ13332 1948 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 SMCO2A6NFE2 343 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 EPOPA6NHQ4 379 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 CAND2O75155 1236 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 FOSP01100 380 aaPredicted RBP18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 POU3F3P20264 500 aaPredicted RBP18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 APOBRQ0VD83 1088 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 PLEKHG4Q58EX7 1191 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 Q6ZUG5 572 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 LMBR1Q8WVP7 490 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 PGBD1Q96JS3 809 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 JAKMIP1Q96N16 626 aaKnown RBP18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 ZBED2Q9BTP6 218 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 OSBPL7Q9BZF2 842 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 NAP1L2Q9ULW6 460 aaPredicted RBP18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 NRCAMQ92823 1304 aa18.88■□□□□ 0.61
CAVIN3-204ENST00000532354 LCHNA4D1U4 455 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 GJB5O95377 273 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 ADCY7P51828 1080 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 ARHGAP4P98171 946 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 FGD1P98174 961 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 MKRN4PQ13434 485 aaPredicted RBP18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 BLOC1S2Q6QNY1 142 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 SPRED2Q7Z698 418 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 CYP2W1Q8TAV3 490 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 BRF1Q92994 677 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 RAD9AQ99638 391 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 KCNH7Q9NS40 1196 aa18.87■□□□□ 0.61
CAVIN3-204ENST00000532354 CLK2P49760 499 aaKnown RBP18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 METAP2P50579 478 aaKnown RBP eCLIP18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 FBXL16Q8N461 479 aa18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 ARNTL2Q8WYA1 636 aa18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 ANO3Q9BYT9 981 aa18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 GLT8D2Q9H1C3 349 aa18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 TMEM260Q9NX78 707 aa18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 ERAP1Q9NZ08 941 aa18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 MTCH2Q9Y6C9 303 aa18.86■□□□□ 0.61
CAVIN3-204ENST00000532354 CCDC196A0A1B0GTZ2 297 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 CTSHP09668 335 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 ARP10275 920 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 RPS6KB1P23443 525 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 PFKFB3Q16875 520 aaPredicted RBP18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 CEP55Q53EZ4 464 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 TJAP1Q5JTD0 557 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 FAM26DQ5JW98 314 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 FAM117BQ6P1L5 589 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 ATXN2LQ8WWM7 1075 aaKnown RBP18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 GLG1Q92896 1179 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 PCYT2Q99447 389 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 AGXT2Q9BYV1 514 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 SMARCAD1Q9H4L7 1026 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 JPH1Q9HDC5 661 aaPredicted RBP18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 SLC9A2Q9UBY0 812 aa18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 SPTBN5Q9NRC6 3674 aaKnown RBP18.85■□□□□ 0.61
CAVIN3-204ENST00000532354 TRANK1O15050 2925 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 MEIS1O00470 390 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 REC8O95072 547 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 SCG2P13521 617 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 MARK3P27448 753 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 SREBF1P36956 1147 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 PPFIA1Q13136 1202 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 AP3B2Q13367 1082 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 MARCH8Q5T0T0 291 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 RUFY4Q6ZNE9 571 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 RPAINQ86UA6 219 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 SEPT8Q92599 483 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 THEGQ9P2T0 379 aa18.84■□□□□ 0.61
CAVIN3-204ENST00000532354 NID2Q14112 1375 aa18.83■□□□□ 0.61
CAVIN3-204ENST00000532354 NFASCO94856 1347 aa18.83■□□□□ 0.61
CAVIN3-204ENST00000532354 LINC01553A4QN01 128 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 PRPF3O43395 683 aaKnown RBP18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 GTPBP6O43824 516 aaPredicted RBP18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 AMHP03971 560 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 PSMA5P28066 241 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 GRIK4Q16099 956 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 PKN1Q16512 942 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 KRT40Q6A162 431 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 MICALL1Q8N3F8 863 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 SDF4Q9BRK5 362 aa18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 AGO4Q9HCK5 861 aaKnown RBP18.83■□□□□ 0.6
CAVIN3-204ENST00000532354 MBLAC1A4D2B0 266 aaPredicted RBP18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 ADAMTS3O15072 1205 aa18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 LPXNO60711 386 aa18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 CHRNA1P02708 482 aa18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 ACTR2P61160 394 aa18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 GRB10Q13322 594 aa18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 ITGB3BPQ13352 177 aaPredicted RBP18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 JAKMIP3Q5VZ66 844 aa18.82■□□□□ 0.6
CAVIN3-204ENST00000532354 TAF2Q6P1X5 1199 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms