RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 HSD17B14Q9BPX1 270 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 UNC45AQ9H3U1 944 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 ZNF112Q9UJU3 913 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 CTDP1Q9Y5B0 961 aaPredicted RBP16.87■□□□□ 0.29
SRPRA-206ENST00000532259 EIF2AK2P19525 551 aaKnown RBP16.87■□□□□ 0.29
SRPRA-206ENST00000532259 LMNB1P20700 586 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
SRPRA-206ENST00000532259 TRAF1Q13077 416 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 LRRC55Q6ZSA7 311 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 ZNF280CQ8ND82 737 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 NOC3LQ8WTT2 800 aaKnown RBP16.87■□□□□ 0.29
SRPRA-206ENST00000532259 SCFD1Q8WVM8 642 aa16.87■□□□□ 0.29
SRPRA-206ENST00000532259 ABL1P00519 1130 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 GTF2F1P35269 517 aaKnown RBP eCLIP16.86■□□□□ 0.29
SRPRA-206ENST00000532259 GNG11P61952 73 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 ETF1P62495 437 aaKnown RBP16.86■□□□□ 0.29
SRPRA-206ENST00000532259 MRPS9P82933 396 aaKnown RBP16.86■□□□□ 0.29
SRPRA-206ENST00000532259 DCAF15Q66K64 600 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 FAM114A1Q8IWE2 563 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 GPC2Q8N158 579 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 SYT2Q8N9I0 419 aaPredicted RBP16.86■□□□□ 0.29
SRPRA-206ENST00000532259 SYTL5Q8TDW5 730 aaPredicted RBP16.86■□□□□ 0.29
SRPRA-206ENST00000532259 KLRG1Q96E93 195 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 WDR24Q96S15 920 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 IKZF4Q9H2S9 585 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 PICK1Q9NRD5 415 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 IPO5O00410 1097 aaKnown RBP16.86■□□□□ 0.29
SRPRA-206ENST00000532259 VWA5AO00534 786 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 DNM2P50570 870 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 NSMFQ6X4W1 530 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 SFR1Q86XK3 245 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 LRRN4CLQ8ND94 238 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
SRPRA-206ENST00000532259 RABGAP1Q9Y3P9 1069 aa16.86■□□□□ 0.29
SRPRA-206ENST00000532259 CCP110O43303 1012 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 APOBEC3FQ8IUX4 373 aaKnown RBP16.85■□□□□ 0.29
SRPRA-206ENST00000532259 ZNF710Q8N1W2 664 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 BANK1Q8NDB2 785 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 KCNH7Q9NS40 1196 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 FAM207AQ9NSI2 230 aaPredicted RBP16.85■□□□□ 0.29
SRPRA-206ENST00000532259 LUC7L2Q9Y383 392 aaKnown RBP16.85■□□□□ 0.29
SRPRA-206ENST00000532259 ADGRG1Q9Y653 693 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 CCDC175P0C221 793 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 MYCLP12524 364 aaPredicted RBP16.85■□□□□ 0.29
SRPRA-206ENST00000532259 PPP1R2P41236 205 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 PSMD2Q13200 908 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 ZCWPW2Q504Y3 356 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 TRERF1Q96PN7 1200 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 TSG101Q99816 390 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 SH2D3AQ9BRG2 576 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 TFR2Q9UP52 801 aa16.85■□□□□ 0.29
SRPRA-206ENST00000532259 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
SRPRA-206ENST00000532259 MYBP10242 640 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 KCNA1Q09470 495 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 PPP2R5CQ13362 524 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
SRPRA-206ENST00000532259 DOCK1Q14185 1865 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 EPHB6O15197 1021 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 URI1O94763 535 aaPredicted RBP16.84■□□□□ 0.29
SRPRA-206ENST00000532259 MAEAQ7L5Y9 396 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 SMCR8Q8TEV9 937 aaPredicted RBP16.84■□□□□ 0.29
SRPRA-206ENST00000532259 NDST4Q9H3R1 872 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 EHMT1Q9H9B1 1298 aa16.84■□□□□ 0.29
SRPRA-206ENST00000532259 ADM5C9JUS6 153 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 KIF2AO00139 706 aaPredicted RBP16.83■□□□□ 0.28
SRPRA-206ENST00000532259 HOXD13P35453 343 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 LRRC63Q05C16 580 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 ITGB3BPQ13352 177 aaPredicted RBP16.83■□□□□ 0.28
SRPRA-206ENST00000532259 CCDC40Q4G0X9 1142 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 VWA3BQ502W6 1294 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 FKBP15Q5T1M5 1219 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 RINT1Q6NUQ1 792 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 MMRN2Q9H8L6 949 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 SPON1Q9HCB6 807 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 RPTORQ8N122 1335 aa16.83■□□□□ 0.28
SRPRA-206ENST00000532259 A0A1W2PQC6 194 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 USP14P54578 494 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 KSR1Q8IVT5 923 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 OR8K1Q8NGG5 319 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 NAA15Q9BXJ9 866 aaKnown RBP16.82■□□□□ 0.28
SRPRA-206ENST00000532259 KCTD10Q9H3F6 313 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 RNF181Q9P0P0 153 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 SAMM50Q9Y512 469 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 ATP9AO75110 1047 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 ZBED4O75132 1171 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 EYA4O95677 639 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 YBX3P16989 372 aaKnown RBP eCLIP16.82■□□□□ 0.284e-7■■■■■ 69.9
SRPRA-206ENST00000532259 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
SRPRA-206ENST00000532259 TRIM14Q14142 442 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 TKFCQ3LXA3 575 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 CYP26C1Q6V0L0 522 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
SRPRA-206ENST00000532259 GTPBP4Q9BZE4 634 aaKnown RBP16.82■□□□□ 0.28
SRPRA-206ENST00000532259 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
SRPRA-206ENST00000532259 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 CTIFO43310 598 aaKnown RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 TBCAO75347 108 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms