RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 MLXIPQ9HAP2 919 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 RC3H2Q9HBD1 1191 aaKnown RBP10.44□□□□□ -0.74
USF1-210ENST00000531842 RTEL1Q9NZ71 1219 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 CD207Q9UJ71 328 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 CDH22Q9UJ99 828 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 MRPL11Q9Y3B7 192 aaKnown RBP10.44□□□□□ -0.74
USF1-210ENST00000531842 EVPLQ92817 2033 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 PPFIA3O75145 1194 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 GLP2RO95838 553 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 ITGB1P05556 798 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 ARP10275 920 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 NDUFV1P49821 464 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 PDE1AP54750 535 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 RRP1P56182 461 aaKnown RBP10.43□□□□□ -0.74
USF1-210ENST00000531842 MRPS9P82933 396 aaKnown RBP10.43□□□□□ -0.74
USF1-210ENST00000531842 ADAM15Q13444 863 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 SMAD4Q13485 552 aaKnown RBP10.43□□□□□ -0.74
USF1-210ENST00000531842 LPIN1Q14693 890 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 RTN4RL1Q86UN2 441 aaPredicted RBP10.43□□□□□ -0.74
USF1-210ENST00000531842 VSIG10LQ86VR7 867 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 EVI5LQ96CN4 794 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 APOL5Q9BWW9 433 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 SENP2Q9HC62 589 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 HCSTQ9UBK5 93 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 FAM50BQ9Y247 325 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 MRPL42Q9Y6G3 142 aaKnown RBP10.43□□□□□ -0.74
USF1-210ENST00000531842 FAM186AA6NE01 2351 aa10.43□□□□□ -0.74
USF1-210ENST00000531842 TRIM6-TRIM34B2RNG4 842 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 C5orf67F2Z3F1 127 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ENPP3O14638 875 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 PER2O15055 1255 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 PARP1P09874 1014 aaKnown RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 MARK3P27448 753 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 NRIP1P48552 1158 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ADAM17P78536 824 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ZXDAP98168 799 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 BTG3Q14201 252 aaPredicted RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 STOX1Q6ZVD7 989 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 CYB5R4Q7L1T6 521 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 DGKHQ86XP1 1220 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 VN1R2Q8NFZ6 395 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ESR2Q92731 530 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ZNF689Q96CS4 500 aaPredicted RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 RPGRIP1Q96KN7 1286 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 PIGSQ96S52 555 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ZSCAN10Q96SZ4 725 aaPredicted RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 GPR20Q99678 358 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 UPF3BQ9BZI7 483 aaKnown RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 KCNH6Q9H252 994 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 AGO3Q9H9G7 860 aaKnown RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 ZSWIM5Q9P217 1185 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ZBTB47Q9UFB7 747 aaPredicted RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 PLAGL2Q9UPG8 496 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 USP15Q9Y4E8 981 aaPredicted RBP10.42□□□□□ -0.74
USF1-210ENST00000531842 PCDHA1Q9Y5I3 950 aa10.42□□□□□ -0.74
USF1-210ENST00000531842 ZMYM6O95789 1325 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 H0Y858 1186 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 GFRA3O60609 400 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 MMP1P03956 469 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 CCND2P30279 289 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 MGAT3Q09327 533 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 TMEM62Q0P6H9 643 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 ASPRV1Q53RT3 343 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 FAM26DQ5JW98 314 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 KLHL23Q8NBE8 558 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 SPPL3Q8TCT6 385 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 DNAJB3Q8WWF6 145 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 CLP1Q92989 425 aaKnown RBP10.41□□□□□ -0.74
USF1-210ENST00000531842 C11orf84Q9BUA3 381 aaPredicted RBP10.41□□□□□ -0.74
USF1-210ENST00000531842 AMNQ9BXJ7 453 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 IL25Q9H293 177 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 SMOC2Q9H3U7 446 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 EHMT1Q9H9B1 1298 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 TLR9Q9NR96 1032 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 PKD2L1Q9P0L9 805 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 MAD2L2Q9UI95 211 aa10.41□□□□□ -0.74
USF1-210ENST00000531842 LOC730098B7Z3J9 87 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 NOP56O00567 594 aaKnown RBP10.4□□□□□ -0.74
USF1-210ENST00000531842 ZNF213O14771 459 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 DGKIO75912 1065 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 CD52P31358 61 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 PTPN5P54829 565 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 IGBP1P78318 339 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 FBXL6Q8N531 539 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 SMRP1Q8NCR6 262 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 MTMR8Q96EF0 704 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 POP1Q99575 1024 aaKnown RBP10.4□□□□□ -0.74
USF1-210ENST00000531842 CDY2AQ9Y6F7 541 aa10.4□□□□□ -0.74
USF1-210ENST00000531842 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 ZBTB5O15062 677 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 CYTH3O43739 400 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 ST18O60284 1047 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 ATP9AO75110 1047 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 EYA4O95677 639 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 RB1P06400 928 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 GHRHRQ02643 423 aa10.39□□□□□ -0.75
USF1-210ENST00000531842 TMEM266Q2M3C6 531 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms