RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 NRCAMQ92823 1304 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 AMHP03971 560 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 CTSHP09668 335 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 ARHGAP4P98171 946 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 ADCK5Q3MIX3 580 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 KRT40Q6A162 431 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 WWC2Q6AWC2 1192 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 RASEFQ8IZ41 740 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 TCEANC2Q96MN5 208 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 EHMT1Q9H9B1 1298 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 JADE2Q9NQC1 790 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 BRPF3Q9ULD4 1205 aa19.29■□□□□ 0.68
CPSF1-207ENST00000531727 SIP14410 1827 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 GSTTP1A0A1W2PQM5 241 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 LINC01553A4QN01 128 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 TNFRSF10AO00220 468 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 MAFGO15525 162 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 ZBTB43O43298 467 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 FUT2Q10981 343 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 KRT32Q14532 448 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 SKIV2LQ15477 1246 aaKnown RBP19.28■□□□□ 0.68
CPSF1-207ENST00000531727 RTN1Q16799 776 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 PPP1R18Q6NYC8 613 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 FAM117BQ6P1L5 589 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 TEX2Q8IWB9 1127 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 ADAMTS19Q8TE59 1207 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 SEPT1Q8WYJ6 367 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 SEPT8Q92599 483 aa19.28■□□□□ 0.68
CPSF1-207ENST00000531727 TGS1Q96RS0 853 aaKnown RBP19.28■□□□□ 0.68
CPSF1-207ENST00000531727 LPXNO60711 386 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 NAPAP54920 295 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 ERVK-21P61565 698 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 FAM26DQ5JW98 314 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 TYW1BQ6NUM6 668 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 MYOCDQ8IZQ8 938 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 IL27Q8NEV9 243 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 GDPD5Q8WTR4 605 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 OSBPL7Q9BZF2 842 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 RIC8AQ9NPQ8 531 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 ERAP1Q9NZ08 941 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 PKD2L1Q9P0L9 805 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 INSL6Q9Y581 213 aa19.27■□□□□ 0.68
CPSF1-207ENST00000531727 XIRP2A4UGR9 3374 aa19.27■□□□□ 0.67
CPSF1-207ENST00000531727 HTRA4P83105 476 aaPredicted RBP19.26■□□□□ 0.67
CPSF1-207ENST00000531727 AAK1Q2M2I8 961 aa19.26■□□□□ 0.67
CPSF1-207ENST00000531727 RPAINQ86UA6 219 aa19.26■□□□□ 0.67
CPSF1-207ENST00000531727 MXRA8Q9BRK3 442 aa19.26■□□□□ 0.67
CPSF1-207ENST00000531727 LMCD1Q9NZU5 365 aa19.26■□□□□ 0.67
CPSF1-207ENST00000531727 KAT6AQ92794 2004 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 KLF18A0A0U1RQI7 1052 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 GOLGA8AA7E2F4 631 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 GOLGA8BA8MQT2 603 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 hCG_1984214I3L0E3 225 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 STXBP3O00186 592 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
CPSF1-207ENST00000531727 ADCY7P51828 1080 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 RCAN1P53805 252 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 TFF2Q03403 129 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 PPFIA1Q13136 1202 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 ZNF713Q8N859 430 aaPredicted RBP19.25■□□□□ 0.67
CPSF1-207ENST00000531727 APBB2Q92870 758 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 GLG1Q92896 1179 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 SMARCAD1Q9H4L7 1026 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 SUGCTQ9HAC7 445 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 JPH1Q9HDC5 661 aaPredicted RBP19.25■□□□□ 0.67
CPSF1-207ENST00000531727 FAM217BQ9NTX9 383 aaPredicted RBP19.25■□□□□ 0.67
CPSF1-207ENST00000531727 MTUS1Q9ULD2 1270 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 COG5Q9UP83 839 aa19.25■□□□□ 0.67
CPSF1-207ENST00000531727 V9GY48 417 aaPredicted RBP19.25■□□□□ 0.67
CPSF1-207ENST00000531727 PRRC2BQ5JSZ5 2229 aaKnown RBP19.25■□□□□ 0.67
CPSF1-207ENST00000531727 FOSP01100 380 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-207ENST00000531727 MARK3P27448 753 aa19.24■□□□□ 0.67
CPSF1-207ENST00000531727 GRIK4Q16099 956 aa19.24■□□□□ 0.67
CPSF1-207ENST00000531727 TAF2Q6P1X5 1199 aa19.24■□□□□ 0.67
CPSF1-207ENST00000531727 RUFY4Q6ZNE9 571 aa19.24■□□□□ 0.67
CPSF1-207ENST00000531727 SP7Q8TDD2 431 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-207ENST00000531727 UHRF1Q96T88 793 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-207ENST00000531727 IFIH1Q9BYX4 1025 aaKnown RBP19.24■□□□□ 0.67
CPSF1-207ENST00000531727 KCNH7Q9NS40 1196 aa19.24■□□□□ 0.67
CPSF1-207ENST00000531727 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
CPSF1-207ENST00000531727 COL4A6Q14031 1691 aa19.24■□□□□ 0.67
CPSF1-207ENST00000531727 MUC3AQ02505 3323 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-207ENST00000531727 MBLAC1A4D2B0 266 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-207ENST00000531727 SMCO2A6NFE2 343 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 CHRNA1P02708 482 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 BMP1P13497 986 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 CDC27P30260 824 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 CYP2W1Q8TAV3 490 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 KCNB2Q92953 911 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 TOP1MTQ969P6 601 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 PGBD1Q96JS3 809 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 ANO3Q9BYT9 981 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 GLT8D2Q9H1C3 349 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 SLC9A2Q9UBY0 812 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 TUBE1Q9UJT0 475 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 NFASCO94856 1347 aa19.23■□□□□ 0.67
CPSF1-207ENST00000531727 SREBF1P36956 1147 aa19.22■□□□□ 0.67
CPSF1-207ENST00000531727 CLK2P49760 499 aaKnown RBP19.22■□□□□ 0.67
CPSF1-207ENST00000531727 MGAT3Q09327 533 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms