RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 CLEC1BQ9P126 229 aa5.69□□□□□ -1.5
SOX6-214ENST00000531297 TSC22D4Q9Y3Q8 395 aa5.69□□□□□ -1.5
SOX6-214ENST00000531297 ABCC3O15438 1527 aa5.69□□□□□ -1.5
SOX6-214ENST00000531297 VWDEQ8N2E2 1590 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 NPEPPSL1A6NEC2 478 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 CYR61O00622 381 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 SCAMP3O14828 347 aaKnown RBP5.68□□□□□ -1.5
SOX6-214ENST00000531297 MAFKO60675 156 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 ZNF16P17020 682 aaPredicted RBP5.68□□□□□ -1.5
SOX6-214ENST00000531297 TACR2P21452 398 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 HMGA2P52926 109 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 ITGA1P56199 1179 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 SCRN1Q12765 414 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 NCAPHQ15003 741 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 KIAA1211LQ6NV74 962 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 PLEKHO2Q8TD55 490 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 COPS5Q92905 334 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 GPRASP2Q96D09 838 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 SORCS2Q96PQ0 1159 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 TMEM168Q9H0V1 697 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 JADE2Q9NQC1 790 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 STRIP2Q9ULQ0 834 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 TIMM13Q9Y5L4 95 aaPredicted RBP5.68□□□□□ -1.5
SOX6-214ENST00000531297 RPGRIP1LQ68CZ1 1315 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 EFCAB6Q5THR3 1501 aa5.68□□□□□ -1.5
SOX6-214ENST00000531297 PTPRTO14522 1441 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 DDX3XO00571 662 aaKnown RBP eCLIP5.67□□□□□ -1.5
SOX6-214ENST00000531297 FZD7O75084 574 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 C6P13671 934 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 PAK2Q13177 524 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 KCNAB2Q13303 367 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 ARHGEF18Q6ZSZ5 1173 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 CIR1Q86X95 450 aaPredicted RBP5.67□□□□□ -1.5
SOX6-214ENST00000531297 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.67□□□□□ -1.5
SOX6-214ENST00000531297 SH3RF3Q8TEJ3 882 aaPredicted RBP5.67□□□□□ -1.5
SOX6-214ENST00000531297 PPP1R14AQ96A00 147 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 TRMT2BQ96GJ1 504 aaKnown RBP5.67□□□□□ -1.5
SOX6-214ENST00000531297 SIN3AQ96ST3 1273 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 DEF6Q9H4E7 631 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 CYP26B1Q9NR63 512 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 FBLN5Q9UBX5 448 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 FTSJ1Q9UET6 329 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 PCDHB10Q9UN67 800 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 EMC9Q9Y3B6 208 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 SIT1Q9Y3P8 196 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 TCAF1Q9Y4C2 921 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 TNRQ92752 1358 aa5.67□□□□□ -1.5
SOX6-214ENST00000531297 NPATQ14207 1427 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 POLR1AO95602 1720 aaPredicted RBP5.66□□□□□ -1.5
SOX6-214ENST00000531297 SGSM2O43147 1006 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 PPP1R11O60927 126 aaPredicted RBP5.66□□□□□ -1.5
SOX6-214ENST00000531297 CASP7P55210 303 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 C9orf131Q5VYM1 1079 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 TEX2Q8IWB9 1127 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 THEMISQ8N1K5 641 aaPredicted RBP5.66□□□□□ -1.5
SOX6-214ENST00000531297 RASGRP4Q8TDF6 673 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 TMEM169Q96HH4 297 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 TMEM209Q96SK2 561 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 BARX1Q9HBU1 254 aaPredicted RBP5.66□□□□□ -1.5
SOX6-214ENST00000531297 ZNF652Q9Y2D9 606 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 EID1Q9Y6B2 187 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 MROH1Q8NDA8 1641 aa5.66□□□□□ -1.5
SOX6-214ENST00000531297 NOS1P29475 1434 aa5.65□□□□□ -1.5
SOX6-214ENST00000531297 TRPM2O94759 1503 aa5.65□□□□□ -1.5
SOX6-214ENST00000531297 HS1BP3Q53T59 392 aa5.65□□□□□ -1.5
SOX6-214ENST00000531297 CEP68Q76N32 757 aa5.65□□□□□ -1.5
SOX6-214ENST00000531297 KLHL6Q8WZ60 621 aa5.65□□□□□ -1.5
SOX6-214ENST00000531297 DIO2Q92813 273 aa5.65□□□□□ -1.5
SOX6-214ENST00000531297 TOE1Q96GM8 510 aaKnown RBP5.65□□□□□ -1.5
SOX6-214ENST00000531297 CCDC140Q96MF4 163 aa5.65□□□□□ -1.5
SOX6-214ENST00000531297 CAMSAP1Q5T5Y3 1602 aa5.65□□□□□ -1.51
SOX6-214ENST00000531297 MROH2AA6NES4 1674 aa5.65□□□□□ -1.51
SOX6-214ENST00000531297 CEP152O94986 1710 aa5.65□□□□□ -1.51
SOX6-214ENST00000531297 ERVK-7P63135 1459 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 NLRP1Q9C000 1473 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 SETD1BQ9UPS6 1966 aaKnown RBP5.64□□□□□ -1.51
SOX6-214ENST00000531297 CLTCQ00610 1675 aaKnown RBP5.64□□□□□ -1.51
SOX6-214ENST00000531297 HGSO14964 777 aaPredicted RBP5.64□□□□□ -1.51
SOX6-214ENST00000531297 CPP00450 1065 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 ZNF28P17035 718 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 RACK1P63244 317 aaKnown RBP5.64□□□□□ -1.51
SOX6-214ENST00000531297 IDI1Q13907 227 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 PRR31Q5SQ13 230 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 GTF2IRD2BQ6EKJ0 949 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 GTF2IRD2Q86UP8 949 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 TRIM59Q8IWR1 403 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 SEC16BQ96JE7 1060 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 KRTAP3-1Q9BYR8 98 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 NKX2-4Q9H2Z4 354 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 GPRC5CQ9NQ84 441 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 ST6GALNAC2Q9UJ37 374 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 X6R8D5 127 aa5.64□□□□□ -1.51
SOX6-214ENST00000531297 E9PCH4 1651 aa5.63□□□□□ -1.51
SOX6-214ENST00000531297 SPHKAPQ2M3C7 1700 aa5.63□□□□□ -1.51
SOX6-214ENST00000531297 FER1L4A9Z1Z3 1794 aa5.63□□□□□ -1.51
SOX6-214ENST00000531297 H7BY64 318 aa5.63□□□□□ -1.51
SOX6-214ENST00000531297 MEFVO15553 781 aaPredicted RBP5.63□□□□□ -1.51
SOX6-214ENST00000531297 HOXC12P31275 282 aa5.63□□□□□ -1.51
SOX6-214ENST00000531297 PPP2CBP62714 309 aa5.63□□□□□ -1.51
SOX6-214ENST00000531297 PPP2CAP67775 309 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms