RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 BANK1Q8NDB2 785 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 LMBR1Q8WVP7 490 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 PABPC5Q96DU9 382 aaKnown RBP10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 INPP4AQ96PE3 977 aaPredicted RBP10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 GPR20Q99678 358 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 RIOX1Q9H6W3 641 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 SETD4Q9NVD3 440 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 MAP3K20Q9NYL2 800 aaKnown RBP10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 CHRNA1P02708 482 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 TGFB3P10600 412 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 ICAM3P32942 547 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 ID4P47928 161 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 MFAP1P55081 439 aaKnown RBP10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 GRM4Q14833 912 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 TIGD5Q53EQ6 642 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 FAM26DQ5JW98 314 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 IFIT1BQ5T764 474 aaKnown RBP10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 KCNV1Q6PIU1 500 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 RUFY4Q6ZNE9 571 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 CHD1LQ86WJ1 897 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 FCHSD1Q86WN1 690 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 SEPT8Q92599 483 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 YME1L1Q96TA2 773 aa10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
CHMP4A-205ENST00000531158 DMDP11532 3685 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 SPATA31C2B4DYI2 1134 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 C5orf67F2Z3F1 127 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 GRM6O15303 877 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 CCND2P30279 289 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 GTF2F1P35269 517 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 NUCB1Q02818 461 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 MGAT3Q09327 533 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 TROAPQ12815 778 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 CAMK1Q14012 370 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 COL9A3Q14050 684 aaPredicted RBP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 IMMTQ16891 758 aaKnown RBP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 CTC1Q2NKJ3 1217 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 PUS10Q3MIT2 529 aaKnown RBP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 METTL7BQ6UX53 244 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 CYFIP1Q7L576 1253 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 LINC01599Q8WXQ3 324 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 ATOH1Q92858 354 aaPredicted RBP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 SAMD11Q96NU1 681 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 UBAC1Q9BSL1 405 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 IFIH1Q9BYX4 1025 aaKnown RBP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 KRT23Q9C075 422 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 NSUN3Q9H649 340 aaKnown RBP10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 EHMT1Q9H9B1 1298 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 MLXIPQ9HAP2 919 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.7
CHMP4A-205ENST00000531158 GCOM1H8Y6P7 765 aaPredicted RBP10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 LINC01565O15544 149 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 CAND2O75155 1236 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 TBX10O75333 385 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 CYP21A2P08686 494 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 POLR2MP0CAP2 368 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 IRS1P35568 1242 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 HYAL1Q12794 435 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 CLUL1Q15846 466 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 PTPROQ16827 1216 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 MARCH8Q5T0T0 291 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 RPAINQ86UA6 219 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 CRIPAKQ8N1N5 446 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 SAMD3Q8N6K7 520 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 PBXIP1Q96AQ6 731 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 ZBTB10Q96DT7 871 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 USP26Q9BXU7 913 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 CNNM2Q9H8M5 875 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 CLDND1Q9NY35 253 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 RTEL1Q9NZ71 1219 aa10.64□□□□□ -0.71
CHMP4A-205ENST00000531158 ADGRA3Q8IWK6 1321 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 ATP9AO75110 1047 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 GHRP10912 638 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 GSPT1P15170 499 aaKnown RBP10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 DNAJB1P25685 340 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 CTNNB1P35222 781 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 ANTXR2P58335 489 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 ARHGAP4P98171 946 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 SP4Q02446 784 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 LPIN1Q14693 890 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 USP17L6PQ6QN14 398 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 ADHFE1Q8IWW8 467 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 SUGP1Q8IWZ8 645 aaKnown RBP10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 CLP1Q92989 425 aaKnown RBP10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 ZNF689Q96CS4 500 aaPredicted RBP10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 CTNNA3Q9UI47 895 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 MUTYHQ9UIF7 546 aa10.63□□□□□ -0.71
CHMP4A-205ENST00000531158 PLXNA3P51805 1871 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 NOP56O00567 594 aaKnown RBP10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 MEIS2O14770 477 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 FIBPO43427 364 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 MBTPS2O43462 519 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 CSPG5O95196 566 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 KCNA2P16389 499 aa10.62□□□□□ -0.71
CHMP4A-205ENST00000531158 PDE4AP27815 886 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms