RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 RXRBP28702 533 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 GPSM2P81274 684 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 NEXNQ0ZGT2 675 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 SLC39A6Q13433 755 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 SAFBQ15424 915 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 MTHFSDQ2M296 383 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 WASHC4Q2M389 1173 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 ZNF362Q5T0B9 420 aaPredicted RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 TMEM53Q6P2H8 277 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 C3orf67Q6ZVT6 689 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 LRRC43Q8N309 656 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 RETREG2Q8NC44 543 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 SNRNP27Q8WVK2 155 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 MPHOSPH6Q99547 160 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 DDX23Q9BUQ8 820 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 ISCUQ9H1K1 167 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 DDX25Q9UHL0 483 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 FBXL5Q9UKA1 691 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 PA2G4Q9UQ80 394 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 TMED5Q9Y3A6 229 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 TBX22Q9Y458 520 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 MROH7Q68CQ1 1323 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 RAD51CO43502 376 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 UBXN1Q04323 297 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 KRT71Q3SY84 523 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 USH1GQ495M9 461 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 CFAP221Q4G0U5 840 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 SMUG1Q53HV7 270 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 MEX3CQ5U5Q3 659 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 C16orf87Q6PH81 154 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 PTF1AQ7RTS3 328 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 IQCF2Q8IXL9 164 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 FITM2Q8N6M3 262 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 EIF1ADQ8N9N8 165 aaKnown RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 RSPH1Q8WYR4 309 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 LRRC45Q96CN5 670 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 ABHD8Q96I13 439 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 RAB3IPQ96QF0 476 aaPredicted RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 NEUROG2Q9H2A3 272 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 DDX21Q9NR30 783 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 CEP126Q9P2H0 1117 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 HPS5Q9UPZ3 1129 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 USP15Q9Y4E8 981 aaPredicted RBP8.48□□□□□ -1.05
PTPRK-219ENST00000531050 CD2APQ9Y5K6 639 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 USH1CQ9Y6N9 552 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 LAMA4Q16363 1823 aa8.48□□□□□ -1.05
PTPRK-219ENST00000531050 HTR3EA5X5Y0 456 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 EIF3FO00303 357 aaPredicted RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 LSM1O15116 133 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 PRPF3O43395 683 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 RAD21O60216 631 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 KRT38O76015 456 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 ALDH2P05091 517 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 FLT3P36888 993 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 SKIV2L2P42285 1042 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 MMP13P45452 471 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 IMMTQ16891 758 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 PARP6Q2NL67 630 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 SLC44A4Q53GD3 710 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 TCP11X2Q5H9J9 407 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 KRT26Q7Z3Y9 468 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 NANOGNBQ7Z5D8 188 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 SCUBE1Q8IWY4 988 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 ANKLE1Q8NAG6 615 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 FAM13CQ8NE31 585 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 CTNNBL1Q8WYA6 563 aaPredicted RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 ABTB1Q969K4 478 aaPredicted RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 IQCDQ96DY2 449 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 AIFM3Q96NN9 605 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 NR1H4Q96RI1 486 aaPredicted RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 ARHGEF38Q9NXL2 777 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 SYNPO2Q9UMS6 1093 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 CTNND2Q9UQB3 1225 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 TBC1D30Q9Y2I9 924 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 R3HDM2Q9Y2K5 976 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 KCNJ18B7U540 433 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 E7EWF7 191 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 GJB6O95452 261 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 CASP1P29466 404 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 PSMD7P51665 324 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 RTP1P59025 263 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 RASSF7Q02833 373 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 TTLL12Q14166 644 aaPredicted RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 KCNJ12Q14500 433 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 HLTFQ14527 1009 aaKnown RBP eCLIP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 LIN52Q52LA3 116 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 EPHA10Q5JZY3 1008 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 MYOCDQ8IZQ8 938 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 NGDNQ8NEJ9 315 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 TTC8Q8TAM2 541 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 ZCRB1Q8TBF4 217 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 CATSPER2Q96P56 530 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 SRPK1Q96SB4 655 aaKnown RBP8.47□□□□□ -1.05
PTPRK-219ENST00000531050 EYA1Q99502 592 aa8.47□□□□□ -1.05
PTPRK-219ENST00000531050 PRMT1Q99873 361 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms