RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 MAFGO15525 162 aa21.29■■□□□ 1
GMDS-208ENST00000530927 TDP2O95551 362 aa21.29■■□□□ 1
GMDS-208ENST00000530927 CCNE2O96020 404 aa21.29■■□□□ 1
GMDS-208ENST00000530927 SMIM10L2AP0DMW4 78 aa21.29■■□□□ 1
GMDS-208ENST00000530927 SMIM10L2BP0DMW5 78 aa21.29■■□□□ 1
GMDS-208ENST00000530927 MARK3P27448 753 aa21.29■■□□□ 1
GMDS-208ENST00000530927 VWCEQ96DN2 955 aa21.29■■□□□ 1
GMDS-208ENST00000530927 TBC1D32Q96NH3 1257 aa21.29■■□□□ 1
GMDS-208ENST00000530927 RNPEPQ9H4A4 650 aa21.29■■□□□ 1
GMDS-208ENST00000530927 SLC9A2Q9UBY0 812 aa21.29■■□□□ 1
GMDS-208ENST00000530927 NOD1Q9Y239 953 aa21.29■■□□□ 1
GMDS-208ENST00000530927 TRIP12Q14669 1992 aaPredicted RBP21.29■■□□□ 1
GMDS-208ENST00000530927 SCN5AQ14524 2016 aa21.29■■□□□ 1
GMDS-208ENST00000530927 A0A1W2PPC1 479 aa21.29■■□□□ 1
GMDS-208ENST00000530927 DHX15O43143 795 aaKnown RBP21.29■■□□□ 1
GMDS-208ENST00000530927 SUPT20HL2P0C7V6 817 aa21.29■■□□□ 1
GMDS-208ENST00000530927 ACTR2P61160 394 aa21.29■■□□□ 1
GMDS-208ENST00000530927 MCTP2Q6DN12 878 aa21.29■■□□□ 1
GMDS-208ENST00000530927 NIPA1Q7RTP0 329 aa21.29■■□□□ 1
GMDS-208ENST00000530927 SEPT1Q8WYJ6 367 aa21.29■■□□□ 1
GMDS-208ENST00000530927 SDF4Q9BRK5 362 aa21.29■■□□□ 1
GMDS-208ENST00000530927 NFASCO94856 1347 aa21.28■■□□□ 1
GMDS-208ENST00000530927 CIITAP33076 1130 aa21.28■■□□□ 1
GMDS-208ENST00000530927 NR5A1Q13285 461 aa21.28■■□□□ 1
GMDS-208ENST00000530927 RABEP1Q15276 862 aa21.28■■□□□ 1
GMDS-208ENST00000530927 INF2Q27J81 1249 aa21.28■■□□□ 1
GMDS-208ENST00000530927 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.28■■□□□ 11e-6■□□□□ 11.1
GMDS-208ENST00000530927 ZNF577Q9BSK1 485 aa21.28■■□□□ 1
GMDS-208ENST00000530927 BACH2Q9BYV9 841 aa21.28■■□□□ 1
GMDS-208ENST00000530927 UPF2Q9HAU5 1272 aaKnown RBP21.28■■□□□ 1
GMDS-208ENST00000530927 SETD4Q9NVD3 440 aa21.28■■□□□ 1
GMDS-208ENST00000530927 IPO5O00410 1097 aaKnown RBP21.27■■□□□ 1
GMDS-208ENST00000530927 GUCY1B3Q02153 619 aa21.27■■□□□ 1
GMDS-208ENST00000530927 TMEM199Q8N511 208 aa21.27■■□□□ 1
GMDS-208ENST00000530927 ZBTB10Q96DT7 871 aa21.27■■□□□ 1
GMDS-208ENST00000530927 TANC1Q9C0D5 1861 aa21.26■□□□□ 0.99
GMDS-208ENST00000530927 MSH4O15457 936 aa21.26■□□□□ 0.99
GMDS-208ENST00000530927 TREHO43280 583 aa21.26■□□□□ 0.99
GMDS-208ENST00000530927 GALNT17Q6IS24 598 aa21.26■□□□□ 0.99
GMDS-208ENST00000530927 PIK3AP1Q6ZUJ8 805 aa21.26■□□□□ 0.99
GMDS-208ENST00000530927 GLG1Q92896 1179 aa21.26■□□□□ 0.99
GMDS-208ENST00000530927 C17orf102A2RUQ5 167 aa21.25■□□□□ 0.99
GMDS-208ENST00000530927 HOXC8P31273 242 aa21.25■□□□□ 0.99
GMDS-208ENST00000530927 SETQ01105 290 aaPredicted RBP21.25■□□□□ 0.99
GMDS-208ENST00000530927 PPIGQ13427 754 aaKnown RBP eCLIP21.25■□□□□ 0.992e-7■■□□□ 11.8
GMDS-208ENST00000530927 NONOQ15233 471 aaKnown RBP eCLIP21.25■□□□□ 0.99
GMDS-208ENST00000530927 TMEM240Q5SV17 173 aa21.25■□□□□ 0.99
GMDS-208ENST00000530927 DEFB128Q7Z7B8 93 aa21.25■□□□□ 0.99
GMDS-208ENST00000530927 WASF1Q92558 559 aa21.25■□□□□ 0.99
GMDS-208ENST00000530927 SLC37A4O43826 429 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 LGR5O75473 907 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 XBP1P17861 261 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 USP11P51784 963 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 TRIM71Q2Q1W2 868 aaKnown RBP21.24■□□□□ 0.99
GMDS-208ENST00000530927 LETM2Q2VYF4 491 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 KRT40Q6A162 431 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 ZNF365Q70YC5 407 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 KRT25Q7Z3Z0 450 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 LMBR1Q8WVP7 490 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 TNFRSF25Q93038 417 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 ATP6V0A1Q93050 837 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 RNPC3Q96LT9 517 aaKnown RBP21.24■□□□□ 0.99
GMDS-208ENST00000530927 IL23AQ9NPF7 189 aa21.24■□□□□ 0.99
GMDS-208ENST00000530927 ZNF215Q9UL58 517 aaPredicted RBP21.24■□□□□ 0.99
GMDS-208ENST00000530927 CCDC194A0A1B0GVG4 234 aa21.23■□□□□ 0.99
GMDS-208ENST00000530927 IQCF3P0C7M6 154 aa21.23■□□□□ 0.99
GMDS-208ENST00000530927 KRT2P35908 639 aa21.23■□□□□ 0.99
GMDS-208ENST00000530927 GPNMBQ14956 572 aa21.23■□□□□ 0.99
GMDS-208ENST00000530927 LRIT3Q3SXY7 679 aa21.23■□□□□ 0.99
GMDS-208ENST00000530927 FAM109BQ6ICB4 259 aaPredicted RBP21.23■□□□□ 0.99
GMDS-208ENST00000530927 FAM177A1Q8N128 213 aaPredicted RBP21.23■□□□□ 0.99
GMDS-208ENST00000530927 ZSCAN31Q96LW9 406 aaPredicted RBP21.23■□□□□ 0.99
GMDS-208ENST00000530927 EMSYQ7Z589 1322 aa21.23■□□□□ 0.99
GMDS-208ENST00000530927 BTBD18B2RXH4 712 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 WNT7AO00755 349 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 ATG7O95352 703 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 MMP1P03956 469 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 CKBP12277 381 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 TRAF7Q6Q0C0 670 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 ABHD15Q6UXT9 468 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 OTOP2Q7RTS6 562 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 CCDC60Q8IWA6 550 aaPredicted RBP21.22■□□□□ 0.99
GMDS-208ENST00000530927 SMARCAD1Q9H4L7 1026 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 SH2B1Q9NRF2 756 aaPredicted RBP21.22■□□□□ 0.99
GMDS-208ENST00000530927 ERAP1Q9NZ08 941 aa21.22■□□□□ 0.99
GMDS-208ENST00000530927 CXXC1Q9P0U4 656 aaPredicted RBP21.22■□□□□ 0.99
GMDS-208ENST00000530927 CYP3A7-CYP3A51PA0A087WV96 503 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 PITPNM1O00562 1244 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 CHMP2AO43633 222 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 ST18O60284 1047 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 CYP3A7P24462 503 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 IGBP1P78318 339 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 PTK7Q13308 1070 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 BFSP2Q13515 415 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 PLCB4Q15147 1175 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 Q4G0T1 1027 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 ZNF618Q5T7W0 954 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 RUFY4Q6ZNE9 571 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 SERINC5Q86VE9 423 aa21.21■□□□□ 0.99
GMDS-208ENST00000530927 DIS3L2Q8IYB7 885 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms