RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ETV3LQ6ZN32 361 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 NLGN1Q8N2Q7 840 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 FAM26EQ8N5C1 309 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.27□□□□□ -0.77
CSDE1-213ENST00000530784 FNIP1Q8TF40 1166 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 NOX5Q96PH1 765 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 DHRS4Q9BTZ2 278 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 ZNF652Q9Y2D9 606 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 PMF1-BGLAPU3KQ54 211 aa10.27□□□□□ -0.77
CSDE1-213ENST00000530784 C8BP07358 591 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 C6orf222P0C671 652 aaPredicted RBP10.26□□□□□ -0.77
CSDE1-213ENST00000530784 GRK2P25098 689 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 GRK3P35626 688 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 FBLN7Q53RD9 439 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 EMC4Q5J8M3 183 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 DPH6Q7L8W6 267 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 SYT3Q9BQG1 590 aa10.26□□□□□ -0.77
CSDE1-213ENST00000530784 CDC42BPAQ5VT25 1732 aa10.25□□□□□ -0.77
CSDE1-213ENST00000530784 HTRA3P83110 453 aa10.25□□□□□ -0.77
CSDE1-213ENST00000530784 BMS1Q14692 1282 aaKnown RBP10.25□□□□□ -0.77
CSDE1-213ENST00000530784 ARRDC4Q8NCT1 418 aa10.25□□□□□ -0.77
CSDE1-213ENST00000530784 PIP4K2CQ8TBX8 421 aa10.25□□□□□ -0.77
CSDE1-213ENST00000530784 PTPRN2Q92932 1015 aa10.25□□□□□ -0.77
CSDE1-213ENST00000530784 KCNJ15Q99712 375 aa10.25□□□□□ -0.77
CSDE1-213ENST00000530784 MRPS23Q9Y3D9 190 aaKnown RBP10.25□□□□□ -0.77
CSDE1-213ENST00000530784 PCDHB4Q9Y5E5 795 aa10.25□□□□□ -0.77
CSDE1-213ENST00000530784 SYCP2Q9BX26 1530 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 SAMD9LQ8IVG5 1584 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 TCRBV5S2A0A599 114 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 STAT5AP42229 794 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 CD300LDQ6UXZ3 194 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 FAM126BQ8IXS8 530 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 LILRB2Q8N423 598 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 JMYQ8N9B5 988 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 UBXN4Q92575 508 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 KISS1RQ969F8 398 aaPredicted RBP10.24□□□□□ -0.77
CSDE1-213ENST00000530784 KIDINS220Q9ULH0 1771 aa10.24□□□□□ -0.77
CSDE1-213ENST00000530784 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
CSDE1-213ENST00000530784 C3P01024 1663 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 FFAR3O14843 346 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 SOD2P04179 222 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 CYP2C8P10632 490 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 BMP7P18075 431 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 VWA3BQ502W6 1294 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 MAMDC2Q7Z304 686 aaPredicted RBP10.23□□□□□ -0.77
CSDE1-213ENST00000530784 LINC01356Q8N9X3 169 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 TP53I13Q8NBR0 393 aaPredicted RBP10.23□□□□□ -0.77
CSDE1-213ENST00000530784 SMOC1Q9H4F8 434 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 IPPKQ9H8X2 491 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 SLC6A20Q9NP91 592 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 MYOTQ9UBF9 498 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 CNTLNQ9NXG0 1405 aa10.23□□□□□ -0.77
CSDE1-213ENST00000530784 KRIT1O00522 736 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 TRIM13O60858 407 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 COL6A2P12110 1019 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 CAP1Q01518 475 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 ZC3H12BQ5HYM0 836 aaKnown RBP10.22□□□□□ -0.77
CSDE1-213ENST00000530784 OTOP3Q7RTS5 596 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 ADGRG2Q8IZP9 1017 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 THAP3Q8WTV1 239 aaPredicted RBP10.22□□□□□ -0.77
CSDE1-213ENST00000530784 GORASP1Q9BQQ3 440 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 YIPF4Q9BSR8 244 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 ALG1Q9BT22 464 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 PLEKHH2Q8IVE3 1493 aa10.22□□□□□ -0.77
CSDE1-213ENST00000530784 AQP7O14520 342 aa10.21□□□□□ -0.77
CSDE1-213ENST00000530784 GABREP78334 506 aa10.21□□□□□ -0.77
CSDE1-213ENST00000530784 NFE2L2Q16236 605 aa10.21□□□□□ -0.77
CSDE1-213ENST00000530784 SAPCD2Q86UD0 394 aa10.21□□□□□ -0.77
CSDE1-213ENST00000530784 ZNF526Q8TF50 670 aaPredicted RBP10.21□□□□□ -0.77
CSDE1-213ENST00000530784 LNPKQ9C0E8 428 aa10.21□□□□□ -0.77
CSDE1-213ENST00000530784 ZSWIM4Q9H7M6 989 aa10.21□□□□□ -0.77
CSDE1-213ENST00000530784 PCDHA8Q9Y5H6 950 aa10.21□□□□□ -0.77
CSDE1-213ENST00000530784 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
CSDE1-213ENST00000530784 CCNB3Q8WWL7 1395 aa10.21□□□□□ -0.78
CSDE1-213ENST00000530784 ATP7AQ04656 1500 aa10.21□□□□□ -0.78
CSDE1-213ENST00000530784 ADAMTS20P59510 1910 aa10.21□□□□□ -0.78
CSDE1-213ENST00000530784 A0A1B0GTL3 188 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 FAM47E-STBD1D6RA91 191 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 SLC27A2O14975 620 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 MAFKO60675 156 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 GNAT1P11488 350 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 DLX2Q07687 328 aaPredicted RBP10.2□□□□□ -0.78
CSDE1-213ENST00000530784 CR1LQ2VPA4 569 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 MTUS2Q5JR59 1369 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 STRCQ7RTU9 1775 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 MTDHQ86UE4 582 aaKnown RBP10.2□□□□□ -0.78
CSDE1-213ENST00000530784 STK32CQ86UX6 486 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 ZC3H18Q86VM9 953 aaKnown RBP10.2□□□□□ -0.78
CSDE1-213ENST00000530784 RBM12BQ8IXT5 1001 aaKnown RBP10.2□□□□□ -0.78
CSDE1-213ENST00000530784 MARCH10Q8NA82 808 aaPredicted RBP10.2□□□□□ -0.78
CSDE1-213ENST00000530784 PHOSPHO1Q8TCT1 267 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 ZBTB8AQ96BR9 441 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 ASH2LQ9UBL3 628 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 CFDP1Q9UEE9 299 aaPredicted RBP10.2□□□□□ -0.78
CSDE1-213ENST00000530784 INO80Q9ULG1 1556 aaPredicted RBP10.2□□□□□ -0.78
CSDE1-213ENST00000530784 KIAA1107Q9UPP5 1409 aa10.2□□□□□ -0.78
CSDE1-213ENST00000530784 NKRFO15226 690 aaKnown RBP eCLIP10.19□□□□□ -0.78
CSDE1-213ENST00000530784 HNRNPMP52272 730 aaKnown RBP eCLIP10.19□□□□□ -0.78
CSDE1-213ENST00000530784 SPIRE1Q08AE8 756 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms