RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 VSTM4Q8IW00 320 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 UHMK1Q8TAS1 419 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 SKA2Q8WVK7 121 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 PIGBQ92521 554 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 SDCCAG3Q96C92 435 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 GBP5Q96PP8 586 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 ENC1O14682 589 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 KRT10P13645 584 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 RNASELQ05823 741 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 LRRC63Q05C16 580 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 TMED2Q15363 201 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 ENOX1Q8TC92 643 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 PDE11AQ9HCR9 933 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 DAAM1Q9Y4D1 1078 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 PCDHB6Q9Y5E3 794 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 HSPA6P17066 643 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 CCNE1P24864 410 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 LIFRP42702 1097 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 FKBP3Q00688 224 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 THOC5Q13769 683 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 SLFN12LQ6IEE8 588 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 CFAP36Q96G28 342 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 STK36Q9NRP7 1315 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 RFX7Q2KHR2 1363 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 SOWAHDA6NJG2 315 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 H7C1W4 665 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 TTC4O95801 387 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 BAG2O95816 211 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 SLC8A1P32418 973 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 DDIT3P35638 169 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 TFAMQ00059 246 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 RASGRF1Q13972 1273 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 CTTNQ14247 550 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 CIAPIN1Q6FI81 312 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 MB21D1Q8N884 522 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 DEPDC1BQ8WUY9 529 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
CTNND1-227ENST00000530748 RCOR1Q9UKL0 485 aa9.17□□□□□ -0.94
CTNND1-227ENST00000530748 STX1BP61266 288 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 COG7P83436 770 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 PDE1BQ01064 536 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 TMEM179Q6ZVK1 233 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 FOXP4Q8IVH2 680 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 GBP7Q8N8V2 638 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 GIMAP8Q8ND71 665 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 NRKQ7Z2Y5 1582 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 UNC13BO14795 1591 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 NEDD4P46934 1319 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ESYT2A0FGR8 921 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 LRRN2O75325 713 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SUN1O94901 812 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 XPAP23025 273 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 NR5A1Q13285 461 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 NRBP1Q9UHY1 535 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 MYO3BQ8WXR4 1341 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 PRPSAP2O60256 369 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 EVI5O60447 810 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 MYL3P08590 195 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SNAP25P60880 206 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 TBC1D10BQ4KMP7 808 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ANKRD20A4Q4UJ75 823 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ANKRD20A8PQ5CZ79 823 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ANKRD20A2Q5SQ80 823 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ANKRD20A1Q5TYW2 823 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 CCDC197Q8NCU1 140 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 TTC1Q99614 292 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SMYD2Q9NRG4 433 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 WDR19Q8NEZ3 1342 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 GOLGA8SH3BPF8 625 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 LDHAP00338 332 aaKnown RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SNCBQ16143 134 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 PI16Q6UXB8 463 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 RYBPQ8N488 228 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 FAM8A1Q9UBU6 413 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 RAD17O75943 681 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SERPINB6P35237 376 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 EIF4A3P38919 411 aaKnown RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ZBED6P86452 979 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SLMAPQ14BN4 828 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 RNF207Q6ZRF8 634 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 MIGA2Q7L4E1 593 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 SRRM1Q8IYB3 904 aaKnown RBP9.16□□□□□ -0.94
CTNND1-227ENST00000530748 CCNYQ8ND76 341 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 PNMA3Q9UL41 463 aa9.16□□□□□ -0.94
CTNND1-227ENST00000530748 ZNF521Q96K83 1311 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 CYP2D7A0A087X1C5 515 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 PLEKHA8P1O95397 391 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms