RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SLC9A1P19634 815 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 GCLMP48507 274 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 GJB7Q6PEY0 223 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 FAM71BQ8TC56 605 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 PAGR1Q9BTK6 254 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 LARSQ9P2J5 1176 aaKnown RBP13.5□□□□□ -0.25
SCN3B-206ENST00000530277 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
SCN3B-206ENST00000530277 KRT19P08727 400 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 ACTN2P35609 894 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 STAT2P52630 851 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 SMTNP53814 917 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 ZC2HC1CQ53FD0 456 aaPredicted RBP13.5□□□□□ -0.25
SCN3B-206ENST00000530277 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 ELMO3Q96BJ8 720 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 CCDC17Q96LX7 622 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 IMPG2Q9BZV3 1241 aa13.5□□□□□ -0.25
SCN3B-206ENST00000530277 TRIM66O15016 1216 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 KIF4AO95239 1232 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 IL17RAQ96F46 866 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 CABS1Q96KC9 395 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 L2HGDHQ9H9P8 463 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF18P17022 549 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 PNMA8AQ86V59 439 aaPredicted RBP13.49□□□□□ -0.25
SCN3B-206ENST00000530277 GLYCTKQ8IVS8 523 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 CCDC170Q8IYT3 715 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 OSBPL9Q96SU4 736 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 CC2D2BQ6DHV5 1058 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
SCN3B-206ENST00000530277 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 SH3GLB2Q9NR46 395 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 MTRF1LQ9UGC7 380 aaKnown RBP13.49□□□□□ -0.25
SCN3B-206ENST00000530277 CAPN11Q9UMQ6 739 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 RRP15Q9Y3B9 282 aaKnown RBP13.49□□□□□ -0.25
SCN3B-206ENST00000530277 PCDHAC2Q9Y5I4 1007 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 ABCB11O95342 1321 aa13.49□□□□□ -0.25
SCN3B-206ENST00000530277 CAMTA1Q9Y6Y1 1673 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 RSPH10B2B2RC85 870 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 TBC1D8O95759 1140 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 RSPH10BP0C881 870 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 NLRX1Q86UT6 975 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 DDX42Q86XP3 938 aaKnown RBP eCLIP13.48□□□□□ -0.25
SCN3B-206ENST00000530277 GLT8D2Q9H1C3 349 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF277Q9NRM2 450 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF446Q9NWS9 450 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 MTUS1Q9ULD2 1270 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 FHOD1Q9Y613 1164 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 CAPN6Q9Y6Q1 641 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
SCN3B-206ENST00000530277 GNA14O95837 355 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 BCRP11274 1271 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 NF2P35240 595 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 COPB2P35606 906 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 PEX3P56589 373 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 OSTNP61366 133 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 PDXDC2PQ6P474 469 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 GIMAP8Q8ND71 665 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-206ENST00000530277 MAGOHBQ96A72 148 aaKnown RBP13.48□□□□□ -0.25
SCN3B-206ENST00000530277 TRPC5Q9UL62 973 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-206ENST00000530277 MYL7Q01449 175 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF543Q08ER8 600 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 TRAF1Q13077 416 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 NNTQ13423 1086 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 RCSD1Q6JBY9 416 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 SPATA4Q8NEY3 305 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 RPGRIP1Q96KN7 1286 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 PLVAPQ9BX97 442 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF341Q9BYN7 854 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 ADAM33Q9BZ11 813 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 MLXIPLQ9NP71 852 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 FBXO28Q9NVF7 368 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 CAPN7Q9Y6W3 813 aa13.48□□□□□ -0.25
SCN3B-206ENST00000530277 RHOBTB3O94955 611 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 FGGP02679 453 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 RCAN1P53805 252 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 LRRC63Q05C16 580 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 ZNF394Q53GI3 561 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 PAF1Q8N7H5 531 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 CYP2W1Q8TAV3 490 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 STK32BQ9NY57 414 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 MON2Q7Z3U7 1717 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 ECE2O60344 883 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 SASH3O75995 380 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 KRT14P02533 472 aa13.47□□□□□ -0.25
SCN3B-206ENST00000530277 NR3C1P04150 777 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms