RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 RB1P06400 928 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 TGFB3P10600 412 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 GHRP10912 638 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
SF3B2-208ENST00000529994 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
SF3B2-208ENST00000529994 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
SF3B2-208ENST00000529994 CYFIP1Q7L576 1253 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 EDAQ92838 391 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 APBB2Q92870 758 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 CD207Q9UJ71 328 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 ADGRA3Q8IWK6 1321 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 CHRNA1P02708 482 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 GNAT1P11488 350 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 GSPT1P15170 499 aaKnown RBP13.11□□□□□ -0.31
SF3B2-208ENST00000529994 NDUFV1P49821 464 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 GHRHRQ02643 423 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
SF3B2-208ENST00000529994 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 RUFY4Q6ZNE9 571 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 PBXIP1Q96AQ6 731 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 USP26Q9BXU7 913 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 LMAN2LQ9H0V9 348 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 TTC3P53804 2025 aa13.11□□□□□ -0.31
SF3B2-208ENST00000529994 TMEM221A6NGB7 291 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 GCOM1H8Y6P7 765 aaPredicted RBP13.1□□□□□ -0.31
SF3B2-208ENST00000529994 M0R296 226 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 HIP1O00291 1037 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 ZBTB5O15062 677 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 POLR2MP0CAP2 368 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 ADAM17P78536 824 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 ADAM15Q13444 863 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 CAMK1Q14012 370 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 FAM26DQ5JW98 314 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 IFIT1BQ5T764 474 aaKnown RBP13.1□□□□□ -0.31
SF3B2-208ENST00000529994 TRIM67Q6ZTA4 783 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 GPR20Q99678 358 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 MAP3K20Q9NYL2 800 aaKnown RBP13.1□□□□□ -0.31
SF3B2-208ENST00000529994 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 PLAGL2Q9UPG8 496 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 CFAP54Q96N23 3096 aa13.1□□□□□ -0.31
SF3B2-208ENST00000529994 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 ENPP3O14638 875 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 MMP1P03956 469 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 DNAJB1P25685 340 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 PTPN5P54829 565 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
SF3B2-208ENST00000529994 SEMA3FQ13275 785 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 LPIN1Q14693 890 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 METTL7BQ6UX53 244 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 ADGRD2Q7Z7M1 963 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 RBM23Q86U06 439 aaKnown RBP13.09□□□□□ -0.31
SF3B2-208ENST00000529994 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
SF3B2-208ENST00000529994 MTMR8Q96EF0 704 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 PIGSQ96S52 555 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 RC3H2Q9HBD1 1191 aaKnown RBP13.09□□□□□ -0.31
SF3B2-208ENST00000529994 FAM86C1Q9NVL1 165 aa13.09□□□□□ -0.31
SF3B2-208ENST00000529994 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-208ENST00000529994 ZFHX2Q9C0A1 2572 aaPredicted RBP13.09□□□□□ -0.31
SF3B2-208ENST00000529994 SPATA31C2B4DYI2 1134 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 TCF15Q12870 199 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 NEDD9Q14511 834 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 GNPTABQ3T906 1256 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
SF3B2-208ENST00000529994 TICAM2Q86XR7 235 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 SUGP1Q8IWZ8 645 aaKnown RBP13.08□□□□□ -0.32
SF3B2-208ENST00000529994 PIBF1Q8WXW3 757 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 ZNF689Q96CS4 500 aaPredicted RBP13.08□□□□□ -0.32
SF3B2-208ENST00000529994 MSLNLQ96KJ4 702 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 INPP4AQ96PE3 977 aaPredicted RBP13.08□□□□□ -0.32
SF3B2-208ENST00000529994 IL25Q9H293 177 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 CLEC1BQ9P126 229 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 PCDHGC5Q9Y5F6 944 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 MRPL42Q9Y6G3 142 aaKnown RBP13.08□□□□□ -0.32
SF3B2-208ENST00000529994 PLXNA4Q9HCM2 1894 aa13.08□□□□□ -0.32
SF3B2-208ENST00000529994 PALM3A6NDB9 673 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-208ENST00000529994 DGKIO75912 1065 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 ITGB1P05556 798 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-208ENST00000529994 MARK3P27448 753 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 ICAM3P32942 547 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 NRIP1P48552 1158 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 ZXDAP98168 799 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 MGAT3Q09327 533 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 IMMTQ16891 758 aaKnown RBP13.07□□□□□ -0.32
SF3B2-208ENST00000529994 BMP8AQ7Z5Y6 402 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 SAMD3Q8N6K7 520 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 SPPL3Q8TCT6 385 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 DNAJB3Q8WWF6 145 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 ZBTB10Q96DT7 871 aa13.07□□□□□ -0.32
SF3B2-208ENST00000529994 RPGRIP1Q96KN7 1286 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms