RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 SAMM50Q9Y512 469 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
CHD7-209ENST00000529472 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 GSTTP1A0A1W2PQM5 241 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 WDR64B1ANS9 1081 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 CHMP4BP1P59074 171 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 NUCB2P80303 420 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 UTP14CQ5TAP6 766 aaKnown RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 CCSAPQ6IQ19 270 aaPredicted RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 ZNF746Q6NUN9 644 aaPredicted RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 CXCL17Q6UXB2 119 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 TRIM50Q86XT4 487 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 ANKLE1Q8NAG6 615 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 SEPT1Q8WYJ6 367 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
CHD7-209ENST00000529472 CEP131Q9UPN4 1083 aa12.87□□□□□ -0.35
CHD7-209ENST00000529472 MOXD2PA6NHM9 499 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 LGALS2P05162 132 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 TECP42680 631 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 DNM1Q05193 864 aaKnown RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 PPP2R5CQ13362 524 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 MIER3Q7Z3K6 550 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 GLG1Q92896 1179 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 PAWRQ96IZ0 340 aaKnown RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 TSEN34Q9BSV6 310 aaKnown RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 MTG1Q9BT17 334 aaPredicted RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 DISC1Q9NRI5 854 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 POLR3EQ9NVU0 708 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 TFIP11Q9UBB9 837 aaKnown RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
CHD7-209ENST00000529472 PCDHA12Q9UN75 941 aa12.86□□□□□ -0.35
CHD7-209ENST00000529472 POTEMA6NI47 508 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 EML1O00423 815 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 LAD1O00515 517 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 BACH1O14867 736 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 KPNA6O60684 536 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 BMP15O95972 392 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 PSAPP07602 524 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 HOXD8P13378 290 aaPredicted RBP12.85□□□□□ -0.35
CHD7-209ENST00000529472 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
CHD7-209ENST00000529472 MARK3P27448 753 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 SFNP31947 248 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 JAK3P52333 1124 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 PSMC6P62333 389 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 MIS18BP1Q6P0N0 1132 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 ABHD15Q6UXT9 468 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 GLT1D1Q96MS3 346 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 SENP6Q9GZR1 1112 aaPredicted RBP12.85□□□□□ -0.35
CHD7-209ENST00000529472 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 PCDHA10Q9Y5I2 948 aa12.85□□□□□ -0.35
CHD7-209ENST00000529472 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 VWA3AA6NCI4 1184 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 F2P00734 622 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 CAPN2P17655 700 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 MARCKSP29966 332 aaPredicted RBP12.84□□□□□ -0.35
CHD7-209ENST00000529472 PRPHP41219 470 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
CHD7-209ENST00000529472 STK38Q15208 465 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 PTPAQ15257 358 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 IL17AQ16552 155 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 SWSAP1Q6NVH7 229 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 B3GNT9Q6UX72 402 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 DTHD1Q6ZMT9 781 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 NECAB2Q7Z6G3 386 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 CCDC60Q8IWA6 550 aaPredicted RBP12.84□□□□□ -0.35
CHD7-209ENST00000529472 RDM1Q8NG50 284 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 KAT2BQ92831 832 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 C16orf70Q9BSU1 422 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 AZI2Q9H6S1 392 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 STARD7Q9NQZ5 370 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 ZNF302Q9NR11 478 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 GABBR1Q9UBS5 961 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 ZNF215Q9UL58 517 aaPredicted RBP12.84□□□□□ -0.35
CHD7-209ENST00000529472 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 EMSYQ7Z589 1322 aa12.84□□□□□ -0.35
CHD7-209ENST00000529472 MYH9P35579 1960 aaKnown RBP12.83□□□□□ -0.35
CHD7-209ENST00000529472 SCN10AQ9Y5Y9 1956 aa12.83□□□□□ -0.35
CHD7-209ENST00000529472 H3BRB1 525 aa12.83□□□□□ -0.36
CHD7-209ENST00000529472 LGR5O75473 907 aa12.83□□□□□ -0.36
CHD7-209ENST00000529472 CAPN15O75808 1086 aa12.83□□□□□ -0.36
CHD7-209ENST00000529472 CABYRO75952 493 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms